Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC25.55■■□□□ 1.68
SBNO1A3KN83 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SBNO1A3KN83 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SBNO1A3KN83 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SBNO1A3KN83 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SBNO1A3KN83 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC25.55■■□□□ 1.68
SBNO1A3KN83 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SBNO1A3KN83 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
SBNO1A3KN83 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
SBNO1A3KN83 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
SBNO1A3KN83 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SBNO1A3KN83 GPR32P1-201ENST00000601788 811 ntBASIC25.55■■□□□ 1.68
SBNO1A3KN83 TP73-AS1-207ENST00000624167 988 ntBASIC25.55■■□□□ 1.68
SBNO1A3KN83 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SBNO1A3KN83 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SBNO1A3KN83 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SBNO1A3KN83 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SBNO1A3KN83 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SBNO1A3KN83 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SBNO1A3KN83 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SBNO1A3KN83 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SBNO1A3KN83 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 AL590627.1-203ENST00000421194 1026 ntBASIC25.54■■□□□ 1.68
SBNO1A3KN83 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SBNO1A3KN83 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SBNO1A3KN83 AL592071.1-201ENST00000611956 408 ntBASIC25.54■■□□□ 1.68
SBNO1A3KN83 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
SBNO1A3KN83 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SBNO1A3KN83 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SBNO1A3KN83 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC25.53■■□□□ 1.68
SBNO1A3KN83 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC25.53■■□□□ 1.68
SBNO1A3KN83 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SBNO1A3KN83 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SBNO1A3KN83 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SBNO1A3KN83 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SBNO1A3KN83 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SBNO1A3KN83 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
SBNO1A3KN83 IGHV3-41-201ENST00000613121 348 ntBASIC25.53■■□□□ 1.68
SBNO1A3KN83 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SBNO1A3KN83 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.53■■□□□ 1.68
SBNO1A3KN83 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SBNO1A3KN83 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SBNO1A3KN83 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SBNO1A3KN83 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SBNO1A3KN83 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.52■■□□□ 1.68
SBNO1A3KN83 AC112907.3-201ENST00000577781 2400 ntBASIC25.52■■□□□ 1.68
SBNO1A3KN83 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SBNO1A3KN83 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SBNO1A3KN83 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SBNO1A3KN83 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SBNO1A3KN83 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC25.52■■□□□ 1.68
SBNO1A3KN83 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.52■■□□□ 1.68
SBNO1A3KN83 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SBNO1A3KN83 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
SBNO1A3KN83 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SBNO1A3KN83 RN7SL606P-201ENST00000472779 293 ntBASIC25.52■■□□□ 1.68
SBNO1A3KN83 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC25.52■■□□□ 1.68
SBNO1A3KN83 TEN1-204ENST00000588202 862 ntTSL 3 BASIC25.52■■□□□ 1.68
SBNO1A3KN83 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC25.52■■□□□ 1.68
SBNO1A3KN83 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
SBNO1A3KN83 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SBNO1A3KN83 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC25.52■■□□□ 1.68
SBNO1A3KN83 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.51■■□□□ 1.67
SBNO1A3KN83 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SBNO1A3KN83 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC25.51■■□□□ 1.67
SBNO1A3KN83 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SBNO1A3KN83 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
SBNO1A3KN83 CDV3-207ENST00000508481 661 ntTSL 3 BASIC25.51■■□□□ 1.67
SBNO1A3KN83 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
SBNO1A3KN83 IGHV3OR16-7-201ENST00000604106 360 ntBASIC25.51■■□□□ 1.67
SBNO1A3KN83 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC25.51■■□□□ 1.67
SBNO1A3KN83 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SBNO1A3KN83 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SBNO1A3KN83 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 MIR574-201ENST00000385209 96 ntBASIC25.5■■□□□ 1.67
SBNO1A3KN83 IGHGP-201ENST00000390555 1178 ntBASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms