Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC66A2RUB6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.38■□□□□ 0.85
CCDC66A2RUB6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 RAP2CP1-201ENST00000605103 478 ntBASIC20.38■□□□□ 0.85
CCDC66A2RUB6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC66A2RUB6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 AL356309.3-201ENST00000624132 1934 ntBASIC20.37■□□□□ 0.85
CCDC66A2RUB6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 AL161938.1-201ENST00000569833 2180 ntBASIC20.37■□□□□ 0.85
CCDC66A2RUB6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 MIPEPP3-201ENST00000412105 444 ntBASIC20.37■□□□□ 0.85
CCDC66A2RUB6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC66A2RUB6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 TEX21P-204ENST00000641479 1693 ntBASIC20.36■□□□□ 0.85
CCDC66A2RUB6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 BICD1-207ENST00000551848 1962 ntBASIC20.36■□□□□ 0.85
CCDC66A2RUB6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 DUSP5P2-201ENST00000426873 1033 ntBASIC20.36■□□□□ 0.85
CCDC66A2RUB6 CROCCP5-201ENST00000436658 830 ntBASIC20.36■□□□□ 0.85
CCDC66A2RUB6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC66A2RUB6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms