Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNF39Q9H2S5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF39Q9H2S5 SNORD74.4-201ENST00000364129 80 ntBASIC3.96□□□□□ -1.78
RNF39Q9H2S5 MIR93-201ENST00000385024 80 ntBASIC3.96□□□□□ -1.78
RNF39Q9H2S5 RNA5SP344-201ENST00000411081 104 ntBASIC3.96□□□□□ -1.78
RNF39Q9H2S5 RN7SL633P-201ENST00000488974 297 ntBASIC3.96□□□□□ -1.78
RNF39Q9H2S5 RNU1-41P-201ENST00000516161 162 ntBASIC3.96□□□□□ -1.78
RNF39Q9H2S5 RNU6-1206P-201ENST00000516339 103 ntBASIC3.96□□□□□ -1.78
RNF39Q9H2S5 RNU1-48P-201ENST00000516400 162 ntBASIC3.96□□□□□ -1.78
RNF39Q9H2S5 SCARNA13-201ENST00000516672 275 ntBASIC3.96□□□□□ -1.78
RNF39Q9H2S5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF39Q9H2S5 AL645939.4-201ENST00000604495 135 ntBASIC3.96□□□□□ -1.78
RNF39Q9H2S5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF39Q9H2S5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF39Q9H2S5 AP000553.6-201ENST00000641242 118 ntBASIC3.96□□□□□ -1.78
RNF39Q9H2S5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RNF39Q9H2S5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF39Q9H2S5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF39Q9H2S5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
RNF39Q9H2S5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF39Q9H2S5 MIR218-2-201ENST00000385006 110 ntBASIC3.95□□□□□ -1.78
RNF39Q9H2S5 SNORD41-201ENST00000386967 70 ntBASIC3.95□□□□□ -1.78
RNF39Q9H2S5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF39Q9H2S5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF39Q9H2S5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF39Q9H2S5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RNF39Q9H2S5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF39Q9H2S5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF39Q9H2S5 RNA5SP403-201ENST00000363598 108 ntBASIC3.94□□□□□ -1.78
RNF39Q9H2S5 SNORA9-201ENST00000384215 133 ntBASIC3.94□□□□□ -1.78
RNF39Q9H2S5 CYCSP4-201ENST00000429682 331 ntBASIC3.94□□□□□ -1.78
RNF39Q9H2S5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF39Q9H2S5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
RNF39Q9H2S5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF39Q9H2S5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
RNF39Q9H2S5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF39Q9H2S5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF39Q9H2S5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF39Q9H2S5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF39Q9H2S5 RNA5SP50-201ENST00000363731 107 ntBASIC3.93□□□□□ -1.78
RNF39Q9H2S5 MIR491-201ENST00000384877 84 ntBASIC3.93□□□□□ -1.78
RNF39Q9H2S5 MIR125B2-201ENST00000385128 89 ntBASIC3.93□□□□□ -1.78
RNF39Q9H2S5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF39Q9H2S5 SNORD105B-201ENST00000458770 79 ntBASIC3.93□□□□□ -1.78
RNF39Q9H2S5 SNORA70.24-201ENST00000517233 118 ntBASIC3.93□□□□□ -1.78
RNF39Q9H2S5 MIR7975-201ENST00000619350 68 ntBASIC3.93□□□□□ -1.78
RNF39Q9H2S5 AC087190.4-201ENST00000574616 8334 ntBASIC3.92□□□□□ -1.78
RNF39Q9H2S5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF39Q9H2S5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF39Q9H2S5 RNVU1-14-201ENST00000384770 164 ntBASIC3.92□□□□□ -1.78
RNF39Q9H2S5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC3.92□□□□□ -1.78
RNF39Q9H2S5 SNORA11.2-201ENST00000408318 127 ntBASIC3.92□□□□□ -1.78
RNF39Q9H2S5 MIR1283-2-201ENST00000408621 87 ntBASIC3.92□□□□□ -1.78
RNF39Q9H2S5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF39Q9H2S5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF39Q9H2S5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF39Q9H2S5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF39Q9H2S5 MIR34B-201ENST00000385076 84 ntBASIC3.91□□□□□ -1.78
RNF39Q9H2S5 HMGN2P3-201ENST00000433603 273 ntBASIC3.91□□□□□ -1.78
RNF39Q9H2S5 HMGN2P5-201ENST00000436882 273 ntBASIC3.91□□□□□ -1.78
RNF39Q9H2S5 AC105272.1-201ENST00000438604 198 ntBASIC3.91□□□□□ -1.78
RNF39Q9H2S5 Y_RNA.633-201ENST00000459107 95 ntBASIC3.91□□□□□ -1.78
RNF39Q9H2S5 SNORA74D-201ENST00000516404 141 ntBASIC3.91□□□□□ -1.78
RNF39Q9H2S5 RNU6-922P-201ENST00000516753 99 ntBASIC3.91□□□□□ -1.78
RNF39Q9H2S5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF39Q9H2S5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF39Q9H2S5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF39Q9H2S5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF39Q9H2S5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
RNF39Q9H2S5 SNORD115-24-201ENST00000363528 82 ntBASIC3.9□□□□□ -1.79
RNF39Q9H2S5 MIR1185-1-201ENST00000408598 86 ntBASIC3.9□□□□□ -1.79
RNF39Q9H2S5 snoU13.21-201ENST00000459368 105 ntBASIC3.9□□□□□ -1.79
RNF39Q9H2S5 AC025518.1-201ENST00000479856 347 ntBASIC3.9□□□□□ -1.79
RNF39Q9H2S5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF39Q9H2S5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF39Q9H2S5 MAPK10-373ENST00000641983 6772 ntBASIC3.9□□□□□ -1.79
RNF39Q9H2S5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF39Q9H2S5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RNF39Q9H2S5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF39Q9H2S5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF39Q9H2S5 SNORD83.1-201ENST00000411362 77 ntBASIC3.89□□□□□ -1.79
RNF39Q9H2S5 AL021921.1-201ENST00000442774 93 ntBASIC3.89□□□□□ -1.79
RNF39Q9H2S5 RNVU1-4-201ENST00000612985 164 ntBASIC3.89□□□□□ -1.79
RNF39Q9H2S5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF39Q9H2S5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF39Q9H2S5 AC003982.1-202ENST00000469928 248 ntBASIC3.88□□□□□ -1.79
RNF39Q9H2S5 MIR3616-201ENST00000584070 92 ntBASIC3.88□□□□□ -1.79
RNF39Q9H2S5 AL359821.1-201ENST00000605519 182 ntBASIC3.88□□□□□ -1.79
RNF39Q9H2S5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF39Q9H2S5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RNF39Q9H2S5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF39Q9H2S5 RNU4-35P-201ENST00000362588 141 ntBASIC3.87□□□□□ -1.79
RNF39Q9H2S5 RNA5SP295-201ENST00000362655 121 ntBASIC3.87□□□□□ -1.79
RNF39Q9H2S5 RNU6-203P-201ENST00000384038 104 ntBASIC3.87□□□□□ -1.79
RNF39Q9H2S5 RN7SL93P-201ENST00000463035 293 ntBASIC3.87□□□□□ -1.79
RNF39Q9H2S5 RPS26P15-201ENST00000488067 348 ntBASIC3.87□□□□□ -1.79
RNF39Q9H2S5 RNU7-160P-201ENST00000516660 62 ntBASIC3.87□□□□□ -1.79
RNF39Q9H2S5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
RNF39Q9H2S5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF39Q9H2S5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms