Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 VTRNA1-1-201ENST00000363120 99 ntBASIC3.05□□□□□ -1.92
RC3H1Q5TC82 RNU6-461P-201ENST00000364195 107 ntBASIC3.05□□□□□ -1.92
RC3H1Q5TC82 RNU6-686P-201ENST00000364839 107 ntBASIC3.05□□□□□ -1.92
RC3H1Q5TC82 RNU6-380P-201ENST00000410207 107 ntBASIC3.05□□□□□ -1.92
RC3H1Q5TC82 SCARNA18B-201ENST00000458806 135 ntBASIC3.05□□□□□ -1.92
RC3H1Q5TC82 AC125388.1-201ENST00000459631 156 ntBASIC3.05□□□□□ -1.92
RC3H1Q5TC82 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.05□□□□□ -1.92
RC3H1Q5TC82 MIR8066-201ENST00000617280 78 ntBASIC3.05□□□□□ -1.92
RC3H1Q5TC82 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.05□□□□□ -1.92
RC3H1Q5TC82 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
RC3H1Q5TC82 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.05□□□□□ -1.92
RC3H1Q5TC82 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RC3H1Q5TC82 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
RC3H1Q5TC82 HSBP1P2-201ENST00000299671 229 ntBASIC3.04□□□□□ -1.92
RC3H1Q5TC82 RNU6-411P-201ENST00000384451 107 ntBASIC3.04□□□□□ -1.92
RC3H1Q5TC82 RNA5SP210-201ENST00000391034 120 ntBASIC3.04□□□□□ -1.92
RC3H1Q5TC82 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.04□□□□□ -1.92
RC3H1Q5TC82 RPL23AP6-201ENST00000446637 472 ntBASIC3.04□□□□□ -1.92
RC3H1Q5TC82 SCARNA16.3-201ENST00000516595 184 ntBASIC3.04□□□□□ -1.92
RC3H1Q5TC82 SNORD14A-201ENST00000606526 91 ntBASIC3.04□□□□□ -1.92
RC3H1Q5TC82 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.04□□□□□ -1.92
RC3H1Q5TC82 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.04□□□□□ -1.92
RC3H1Q5TC82 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
RC3H1Q5TC82 SNORA63.2-201ENST00000362603 126 ntBASIC3.03□□□□□ -1.92
RC3H1Q5TC82 SNORA38-201ENST00000363946 132 ntBASIC3.03□□□□□ -1.92
RC3H1Q5TC82 RNU6-871P-201ENST00000516122 100 ntBASIC3.03□□□□□ -1.92
RC3H1Q5TC82 MIR5007-201ENST00000583098 95 ntBASIC3.03□□□□□ -1.92
RC3H1Q5TC82 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
RC3H1Q5TC82 MIR29C-201ENST00000385231 88 ntBASIC3.02□□□□□ -1.93
RC3H1Q5TC82 RPS29P11-201ENST00000496507 171 ntBASIC3.02□□□□□ -1.93
RC3H1Q5TC82 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.02□□□□□ -1.93
RC3H1Q5TC82 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.02□□□□□ -1.93
RC3H1Q5TC82 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RC3H1Q5TC82 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RC3H1Q5TC82 RNY1P13-201ENST00000365030 105 ntBASIC3.01□□□□□ -1.93
RC3H1Q5TC82 Y_RNA.340-201ENST00000365330 92 ntBASIC3.01□□□□□ -1.93
RC3H1Q5TC82 Y_RNA.508-201ENST00000384502 114 ntBASIC3.01□□□□□ -1.93
RC3H1Q5TC82 SNORA74.3-201ENST00000517108 154 ntBASIC3.01□□□□□ -1.93
RC3H1Q5TC82 AL512598.1-201ENST00000610158 273 ntBASIC3.01□□□□□ -1.93
RC3H1Q5TC82 AL513423.1-201ENST00000621695 132 ntBASIC3.01□□□□□ -1.93
RC3H1Q5TC82 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
RC3H1Q5TC82 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
RC3H1Q5TC82 RNU1-91P-201ENST00000364746 163 ntBASIC3□□□□□ -1.93
RC3H1Q5TC82 RNU6-1237P-201ENST00000384777 107 ntBASIC3□□□□□ -1.93
RC3H1Q5TC82 MIR660-201ENST00000385235 97 ntBASIC3□□□□□ -1.93
RC3H1Q5TC82 BX510359.4-201ENST00000423750 193 ntBASIC3□□□□□ -1.93
RC3H1Q5TC82 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
RC3H1Q5TC82 RNU7-85P-201ENST00000458851 63 ntBASIC2.99□□□□□ -1.93
RC3H1Q5TC82 CYP3A52P-201ENST00000563326 91 ntBASIC2.99□□□□□ -1.93
RC3H1Q5TC82 AC133485.1-201ENST00000567176 124 ntBASIC2.99□□□□□ -1.93
RC3H1Q5TC82 MIR4796-201ENST00000580742 81 ntBASIC2.99□□□□□ -1.93
RC3H1Q5TC82 AC067747.1-201ENST00000608026 250 ntBASIC2.99□□□□□ -1.93
RC3H1Q5TC82 AC021506.2-201ENST00000612354 169 ntBASIC2.99□□□□□ -1.93
RC3H1Q5TC82 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
RC3H1Q5TC82 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RC3H1Q5TC82 AL161431.1-201ENST00000618966 4205 ntBASIC2.99□□□□□ -1.93
RC3H1Q5TC82 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
RC3H1Q5TC82 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.98□□□□□ -1.93
RC3H1Q5TC82 Y_RNA.660-201ENST00000516002 120 ntBASIC2.98□□□□□ -1.93
RC3H1Q5TC82 RNU6-1015P-201ENST00000517121 99 ntBASIC2.98□□□□□ -1.93
RC3H1Q5TC82 AP000753.3-201ENST00000604083 169 ntBASIC2.98□□□□□ -1.93
RC3H1Q5TC82 AC022202.1-201ENST00000613515 211 ntBASIC2.98□□□□□ -1.93
RC3H1Q5TC82 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RC3H1Q5TC82 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.97□□□□□ -1.93
RC3H1Q5TC82 RNU6-161P-201ENST00000363051 106 ntBASIC2.97□□□□□ -1.93
RC3H1Q5TC82 FO624990.1-201ENST00000636373 85 ntBASIC2.97□□□□□ -1.93
RC3H1Q5TC82 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RC3H1Q5TC82 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RC3H1Q5TC82 RNY1P2-201ENST00000364820 117 ntBASIC2.96□□□□□ -1.94
RC3H1Q5TC82 SNORA25.9-201ENST00000365087 128 ntBASIC2.96□□□□□ -1.94
RC3H1Q5TC82 MIR1265-201ENST00000408444 86 ntBASIC2.96□□□□□ -1.94
RC3H1Q5TC82 RNU4-83P-201ENST00000410863 133 ntBASIC2.96□□□□□ -1.94
RC3H1Q5TC82 RNU7-43P-201ENST00000516554 64 ntBASIC2.96□□□□□ -1.94
RC3H1Q5TC82 RNU6-448P-201ENST00000517052 107 ntBASIC2.96□□□□□ -1.94
RC3H1Q5TC82 MIR6873-201ENST00000622788 63 ntBASIC2.96□□□□□ -1.94
RC3H1Q5TC82 AC008133.2-201ENST00000624540 351 ntBASIC2.96□□□□□ -1.94
RC3H1Q5TC82 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.96□□□□□ -1.94
RC3H1Q5TC82 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RC3H1Q5TC82 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RC3H1Q5TC82 RNU7-26P-201ENST00000458980 63 ntBASIC2.95□□□□□ -1.94
RC3H1Q5TC82 Y_RNA.648-201ENST00000459455 110 ntBASIC2.95□□□□□ -1.94
RC3H1Q5TC82 FGF7P7-201ENST00000514120 227 ntBASIC2.95□□□□□ -1.94
RC3H1Q5TC82 RNU6-548P-201ENST00000517083 115 ntBASIC2.95□□□□□ -1.94
RC3H1Q5TC82 AC141846.1-201ENST00000568348 142 ntBASIC2.95□□□□□ -1.94
RC3H1Q5TC82 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.95□□□□□ -1.94
RC3H1Q5TC82 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
RC3H1Q5TC82 AC008163.1-202ENST00000636004 2889 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 RNA5SP99-201ENST00000364020 114 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 SNORD38B-201ENST00000384690 67 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 MIR520A-201ENST00000384862 85 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 MIR597-201ENST00000384968 97 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 RNU11-3P-201ENST00000391111 133 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 AL023284.1-201ENST00000403956 276 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 SNORD88.1-201ENST00000408684 91 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 RNU2-7P-201ENST00000410794 178 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 SNRPGP12-201ENST00000449481 213 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 HMGN2P23-201ENST00000456759 269 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.94□□□□□ -1.94
RC3H1Q5TC82 RNU6-1108P-201ENST00000516308 104 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 MIR4709-201ENST00000577272 72 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms