Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RNA5SP508-201ENST00000411327 119 ntBASIC2.46□□□□□ -2.02
EPHA4P54764 RNA5SP320-201ENST00000516263 124 ntBASIC2.46□□□□□ -2.02
EPHA4P54764 RNU6-922P-201ENST00000516753 99 ntBASIC2.46□□□□□ -2.02
EPHA4P54764 AL662814.1-201ENST00000617364 121 ntBASIC2.46□□□□□ -2.02
EPHA4P54764 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.46□□□□□ -2.02
EPHA4P54764 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.46□□□□□ -2.02
EPHA4P54764 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
EPHA4P54764 RNA5SP276-201ENST00000362580 94 ntBASIC2.45□□□□□ -2.02
EPHA4P54764 AC019129.1-201ENST00000403786 261 ntBASIC2.45□□□□□ -2.02
EPHA4P54764 MIR5092-201ENST00000583139 88 ntBASIC2.45□□□□□ -2.02
EPHA4P54764 AC067747.1-201ENST00000608026 250 ntBASIC2.45□□□□□ -2.02
EPHA4P54764 AC012676.2-201ENST00000619258 186 ntBASIC2.45□□□□□ -2.02
EPHA4P54764 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
EPHA4P54764 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
EPHA4P54764 RNU6-228P-201ENST00000362700 106 ntBASIC2.44□□□□□ -2.02
EPHA4P54764 AL161935.2-201ENST00000414627 60 ntBASIC2.44□□□□□ -2.02
EPHA4P54764 RNU6-267P-201ENST00000516714 103 ntBASIC2.44□□□□□ -2.02
EPHA4P54764 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.44□□□□□ -2.02
EPHA4P54764 SEPT14P17-201ENST00000617978 177 ntBASIC2.44□□□□□ -2.02
EPHA4P54764 WWP1P1-201ENST00000466609 2769 ntBASIC2.44□□□□□ -2.02
EPHA4P54764 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
EPHA4P54764 RNU6-396P-201ENST00000365369 105 ntBASIC2.43□□□□□ -2.02
EPHA4P54764 RNU6-979P-201ENST00000383896 107 ntBASIC2.43□□□□□ -2.02
EPHA4P54764 Y_RNA.609-201ENST00000410669 89 ntBASIC2.43□□□□□ -2.02
EPHA4P54764 HSPE1P24-201ENST00000450782 238 ntBASIC2.43□□□□□ -2.02
EPHA4P54764 RPS29P11-201ENST00000496507 171 ntBASIC2.43□□□□□ -2.02
EPHA4P54764 AP000753.3-201ENST00000604083 169 ntBASIC2.43□□□□□ -2.02
EPHA4P54764 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
EPHA4P54764 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
EPHA4P54764 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
EPHA4P54764 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
EPHA4P54764 RNU6-949P-201ENST00000384040 107 ntBASIC2.42□□□□□ -2.02
EPHA4P54764 AL359511.1-201ENST00000402970 211 ntBASIC2.42□□□□□ -2.02
EPHA4P54764 Y_RNA.611-201ENST00000410682 108 ntBASIC2.42□□□□□ -2.02
EPHA4P54764 RNU1-98P-201ENST00000458992 160 ntBASIC2.42□□□□□ -2.02
EPHA4P54764 GHRLOS.1-201ENST00000610995 70 ntBASIC2.42□□□□□ -2.02
EPHA4P54764 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
EPHA4P54764 RNA5SP456-201ENST00000364002 114 ntBASIC2.41□□□□□ -2.02
EPHA4P54764 SNORD41-201ENST00000386967 70 ntBASIC2.41□□□□□ -2.02
EPHA4P54764 MIR1255A-201ENST00000408338 113 ntBASIC2.41□□□□□ -2.02
EPHA4P54764 snoU13.2-201ENST00000459201 104 ntBASIC2.41□□□□□ -2.02
EPHA4P54764 RNU7-171P-201ENST00000459581 62 ntBASIC2.41□□□□□ -2.02
EPHA4P54764 RNA5SP24-201ENST00000516478 95 ntBASIC2.41□□□□□ -2.02
EPHA4P54764 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
EPHA4P54764 MIR4287-201ENST00000579398 78 ntBASIC2.41□□□□□ -2.02
EPHA4P54764 MIR3945-201ENST00000581853 98 ntBASIC2.41□□□□□ -2.02
EPHA4P54764 AL049779.4-201ENST00000604500 156 ntBASIC2.41□□□□□ -2.02
EPHA4P54764 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.41□□□□□ -2.02
EPHA4P54764 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
EPHA4P54764 Y_RNA.173-201ENST00000363776 113 ntBASIC2.4□□□□□ -2.03
EPHA4P54764 SNORA67.1-201ENST00000364749 141 ntBASIC2.4□□□□□ -2.03
EPHA4P54764 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
EPHA4P54764 MIR4264-201ENST00000583520 66 ntBASIC2.4□□□□□ -2.03
EPHA4P54764 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.4□□□□□ -2.03
EPHA4P54764 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.4□□□□□ -2.03
EPHA4P54764 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
EPHA4P54764 AC016717.2-201ENST00000609089 5141 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 Y_RNA.168-201ENST00000363740 102 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 RNY1P2-201ENST00000364820 117 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 SNORA6-201ENST00000384033 151 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 Y_RNA.437-201ENST00000384113 113 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 RNU6-439P-201ENST00000384188 106 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 MIR588-201ENST00000384900 83 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 RNA5SP210-201ENST00000391034 120 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 RNA5SP225-201ENST00000410874 135 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 AC244636.1-201ENST00000421152 228 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 AL161932.1-201ENST00000437408 146 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 MIR2115-201ENST00000516657 100 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 FO624990.1-201ENST00000636373 85 ntBASIC2.39□□□□□ -2.03
EPHA4P54764 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
EPHA4P54764 RNU6-633P-201ENST00000362612 103 ntBASIC2.38□□□□□ -2.03
EPHA4P54764 RNU6-509P-201ENST00000363519 107 ntBASIC2.38□□□□□ -2.03
EPHA4P54764 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
EPHA4P54764 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
EPHA4P54764 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.38□□□□□ -2.03
EPHA4P54764 AL773524.1-201ENST00000614065 229 ntBASIC2.38□□□□□ -2.03
EPHA4P54764 MIR8074-201ENST00000615081 81 ntBASIC2.38□□□□□ -2.03
EPHA4P54764 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
EPHA4P54764 HSBP1P2-201ENST00000299671 229 ntBASIC2.37□□□□□ -2.03
EPHA4P54764 Y_RNA.4-201ENST00000362333 112 ntBASIC2.37□□□□□ -2.03
EPHA4P54764 AC008413.1-201ENST00000511864 177 ntBASIC2.37□□□□□ -2.03
EPHA4P54764 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
EPHA4P54764 MIR4666B-201ENST00000578142 81 ntBASIC2.37□□□□□ -2.03
EPHA4P54764 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
EPHA4P54764 SNORD53-201ENST00000579969 78 ntBASIC2.37□□□□□ -2.03
EPHA4P54764 SNORA4-201ENST00000584302 138 ntBASIC2.37□□□□□ -2.03
EPHA4P54764 PRELID3BP2-201ENST00000605362 201 ntBASIC2.37□□□□□ -2.03
EPHA4P54764 AC025521.1-201ENST00000621624 286 ntBASIC2.37□□□□□ -2.03
EPHA4P54764 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
EPHA4P54764 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
EPHA4P54764 MIR181B2-201ENST00000385004 89 ntBASIC2.36□□□□□ -2.03
EPHA4P54764 RNU4-53P-201ENST00000410828 140 ntBASIC2.36□□□□□ -2.03
EPHA4P54764 RNA5SP445-201ENST00000515889 115 ntBASIC2.36□□□□□ -2.03
EPHA4P54764 RNU6-947P-201ENST00000516264 106 ntBASIC2.36□□□□□ -2.03
EPHA4P54764 AL513043.2-201ENST00000573941 143 ntBASIC2.36□□□□□ -2.03
EPHA4P54764 AC015688.6-201ENST00000577737 104 ntBASIC2.36□□□□□ -2.03
EPHA4P54764 MIR4713-201ENST00000582691 75 ntBASIC2.36□□□□□ -2.03
EPHA4P54764 MIR3192-201ENST00000584920 77 ntBASIC2.36□□□□□ -2.03
EPHA4P54764 AL096861.1-201ENST00000610899 123 ntBASIC2.36□□□□□ -2.03
EPHA4P54764 MIR548BB-201ENST00000626714 66 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms