Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SNORA63.2-201ENST00000362603 126 ntBASIC2.8□□□□□ -1.96
VARSP26640 RNU6-686P-201ENST00000364839 107 ntBASIC2.8□□□□□ -1.96
VARSP26640 SNORA9.2-201ENST00000365361 133 ntBASIC2.8□□□□□ -1.96
VARSP26640 RNU6-949P-201ENST00000384040 107 ntBASIC2.8□□□□□ -1.96
VARSP26640 MIR524-201ENST00000385242 87 ntBASIC2.8□□□□□ -1.96
VARSP26640 RNU6-850P-201ENST00000516934 103 ntBASIC2.8□□□□□ -1.96
VARSP26640 MIR4796-201ENST00000580742 81 ntBASIC2.8□□□□□ -1.96
VARSP26640 MIR3945-201ENST00000581853 98 ntBASIC2.8□□□□□ -1.96
VARSP26640 MIR3670-2-201ENST00000582974 65 ntBASIC2.8□□□□□ -1.96
VARSP26640 MIR3670-1-201ENST00000584160 65 ntBASIC2.8□□□□□ -1.96
VARSP26640 MIR3670-3-201ENST00000584855 65 ntBASIC2.8□□□□□ -1.96
VARSP26640 AL033523.1-201ENST00000605153 153 ntBASIC2.8□□□□□ -1.96
VARSP26640 MIR3670-4-201ENST00000612260 65 ntBASIC2.8□□□□□ -1.96
VARSP26640 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
VARSP26640 RNU6-161P-201ENST00000363051 106 ntBASIC2.79□□□□□ -1.96
VARSP26640 RNA5SP270-201ENST00000411361 118 ntBASIC2.79□□□□□ -1.96
VARSP26640 SNRPGP12-201ENST00000449481 213 ntBASIC2.79□□□□□ -1.96
VARSP26640 AC023790.1-201ENST00000482174 347 ntBASIC2.79□□□□□ -1.96
VARSP26640 RNU7-41P-201ENST00000515917 61 ntBASIC2.79□□□□□ -1.96
VARSP26640 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.79□□□□□ -1.96
VARSP26640 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VARSP26640 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.78□□□□□ -1.96
VARSP26640 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.78□□□□□ -1.96
VARSP26640 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VARSP26640 RNU1-138P-201ENST00000384093 164 ntBASIC2.78□□□□□ -1.96
VARSP26640 Y_RNA.648-201ENST00000459455 110 ntBASIC2.78□□□□□ -1.96
VARSP26640 AC138749.4-201ENST00000563970 127 ntBASIC2.78□□□□□ -1.96
VARSP26640 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
VARSP26640 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.77□□□□□ -1.97
VARSP26640 MIR512-1-201ENST00000384913 84 ntBASIC2.77□□□□□ -1.97
VARSP26640 HMGN2P39-201ENST00000398005 273 ntBASIC2.77□□□□□ -1.97
VARSP26640 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.77□□□□□ -1.97
VARSP26640 RNU6-1108P-201ENST00000516308 104 ntBASIC2.77□□□□□ -1.97
VARSP26640 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.77□□□□□ -1.97
VARSP26640 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VARSP26640 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VARSP26640 RNU6-411P-201ENST00000384451 107 ntBASIC2.76□□□□□ -1.97
VARSP26640 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VARSP26640 BX276092.1-201ENST00000427368 251 ntBASIC2.76□□□□□ -1.97
VARSP26640 AL139132.1-201ENST00000431587 344 ntBASIC2.76□□□□□ -1.97
VARSP26640 AC009474.2-201ENST00000451383 136 ntBASIC2.76□□□□□ -1.97
VARSP26640 AL161722.3-201ENST00000605789 2983 ntBASIC2.76□□□□□ -1.97
VARSP26640 AC010297.1-201ENST00000623948 149 ntBASIC2.76□□□□□ -1.97
VARSP26640 U6.109-201ENST00000636749 87 ntBASIC2.76□□□□□ -1.97
VARSP26640 AC131280.1-202ENST00000624067 4211 ntBASIC2.76□□□□□ -1.97
VARSP26640 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
VARSP26640 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VARSP26640 SNORA67.1-201ENST00000364749 141 ntBASIC2.75□□□□□ -1.97
VARSP26640 AC244023.1-201ENST00000426884 112 ntBASIC2.75□□□□□ -1.97
VARSP26640 SNORA31.15-201ENST00000516771 132 ntBASIC2.75□□□□□ -1.97
VARSP26640 AC242498.1-201ENST00000604134 111 ntBASIC2.75□□□□□ -1.97
VARSP26640 AC245884.12-201ENST00000615364 59 ntBASIC2.75□□□□□ -1.97
VARSP26640 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
VARSP26640 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.75□□□□□ -1.97
VARSP26640 AC008163.1-202ENST00000636004 2889 ntBASIC2.75□□□□□ -1.97
VARSP26640 RNA5SP393-201ENST00000363423 117 ntBASIC2.74□□□□□ -1.97
VARSP26640 SNORA25.9-201ENST00000365087 128 ntBASIC2.74□□□□□ -1.97
VARSP26640 RNU6-811P-201ENST00000384069 107 ntBASIC2.74□□□□□ -1.97
VARSP26640 SNORA72.6-201ENST00000384520 129 ntBASIC2.74□□□□□ -1.97
VARSP26640 RNA5SP292-201ENST00000390974 118 ntBASIC2.74□□□□□ -1.97
VARSP26640 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.74□□□□□ -1.97
VARSP26640 RNU6-539P-201ENST00000516665 103 ntBASIC2.74□□□□□ -1.97
VARSP26640 DEFB122-202ENST00000569013 197 ntBASIC2.74□□□□□ -1.97
VARSP26640 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.74□□□□□ -1.97
VARSP26640 MIR4536-1-201ENST00000583537 88 ntBASIC2.74□□□□□ -1.97
VARSP26640 AL049779.4-201ENST00000604500 156 ntBASIC2.74□□□□□ -1.97
VARSP26640 MIR6715A-201ENST00000615929 79 ntBASIC2.74□□□□□ -1.97
VARSP26640 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.74□□□□□ -1.97
VARSP26640 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.74□□□□□ -1.97
VARSP26640 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
VARSP26640 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.74□□□□□ -1.97
VARSP26640 Y_RNA.119-201ENST00000363301 96 ntBASIC2.73□□□□□ -1.97
VARSP26640 SNORA3A-201ENST00000364113 130 ntBASIC2.73□□□□□ -1.97
VARSP26640 RNU6-571P-201ENST00000384128 107 ntBASIC2.73□□□□□ -1.97
VARSP26640 SNORA40.18-201ENST00000391200 128 ntBASIC2.73□□□□□ -1.97
VARSP26640 RNA5SP508-201ENST00000411327 119 ntBASIC2.73□□□□□ -1.97
VARSP26640 snoU13.2-201ENST00000459201 104 ntBASIC2.73□□□□□ -1.97
VARSP26640 RNU6-322P-201ENST00000516010 103 ntBASIC2.73□□□□□ -1.97
VARSP26640 SNORA9.3-201ENST00000516383 129 ntBASIC2.73□□□□□ -1.97
VARSP26640 MIR4446-201ENST00000578505 67 ntBASIC2.73□□□□□ -1.97
VARSP26640 WWP1P1-201ENST00000466609 2769 ntBASIC2.72□□□□□ -1.97
VARSP26640 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VARSP26640 RNU6-1123P-201ENST00000362347 106 ntBASIC2.72□□□□□ -1.97
VARSP26640 RNU1-51P-201ENST00000365345 176 ntBASIC2.72□□□□□ -1.97
VARSP26640 RNU6-203P-201ENST00000384038 104 ntBASIC2.72□□□□□ -1.97
VARSP26640 MIR588-201ENST00000384900 83 ntBASIC2.72□□□□□ -1.97
VARSP26640 RNA5SP100-201ENST00000410903 110 ntBASIC2.72□□□□□ -1.97
VARSP26640 RNA5SP59-201ENST00000410922 110 ntBASIC2.72□□□□□ -1.97
VARSP26640 AC087499.2-201ENST00000432861 149 ntBASIC2.72□□□□□ -1.97
VARSP26640 AC005908.1-201ENST00000468701 347 ntBASIC2.72□□□□□ -1.97
VARSP26640 SNORA18.5-201ENST00000516616 101 ntBASIC2.72□□□□□ -1.97
VARSP26640 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.72□□□□□ -1.97
VARSP26640 MIR4319-201ENST00000577285 85 ntBASIC2.72□□□□□ -1.97
VARSP26640 MIR4484-201ENST00000582855 83 ntBASIC2.72□□□□□ -1.97
VARSP26640 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.72□□□□□ -1.97
VARSP26640 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.72□□□□□ -1.97
VARSP26640 U1.36-201ENST00000620684 176 ntBASIC2.72□□□□□ -1.97
VARSP26640 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.72□□□□□ -1.97
VARSP26640 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
VARSP26640 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms