Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FO393413.1-201ENST00000402892 195 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM47Q96LD4 snoU13.23-201ENST00000458863 104 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 Y_RNA.648-201ENST00000459455 110 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 CKS1BP2-201ENST00000497342 240 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 SNORA28-201ENST00000606769 126 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 MIR5739-201ENST00000619803 80 ntBASIC3.12□□□□□ -1.91
TRIM47Q96LD4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM47Q96LD4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM47Q96LD4 RNA5SP289-201ENST00000362332 137 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 RNU4-83P-201ENST00000410863 133 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM47Q96LD4 SNORA9.3-201ENST00000516383 129 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 MIR8065-201ENST00000620577 100 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 MIR8054-201ENST00000620877 86 ntBASIC3.11□□□□□ -1.91
TRIM47Q96LD4 RNU6-833P-201ENST00000363486 107 ntBASIC3.1□□□□□ -1.91
TRIM47Q96LD4 MIR95-201ENST00000385072 81 ntBASIC3.1□□□□□ -1.91
TRIM47Q96LD4 RNU6-630P-201ENST00000391258 106 ntBASIC3.1□□□□□ -1.91
TRIM47Q96LD4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM47Q96LD4 AC067747.1-201ENST00000608026 250 ntBASIC3.1□□□□□ -1.91
TRIM47Q96LD4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM47Q96LD4 AL355596.1-201ENST00000565399 3996 ntBASIC3.1□□□□□ -1.91
TRIM47Q96LD4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM47Q96LD4 SNORD21-201ENST00000383953 95 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 SNORA8.1-201ENST00000384250 140 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 SNORD28B-201ENST00000390993 75 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 AC015818.7-201ENST00000428754 109 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 RPS29P11-201ENST00000496507 171 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 DEFB122-202ENST00000569013 197 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 MIR3605-201ENST00000583214 100 ntBASIC3.09□□□□□ -1.91
TRIM47Q96LD4 AP000648.3-201ENST00000623539 4507 ntBASIC3.09□□□□□ -1.92
TRIM47Q96LD4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.92
TRIM47Q96LD4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.09□□□□□ -1.92
TRIM47Q96LD4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 MIR26A1-201ENST00000362205 77 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.12-201ENST00000362393 112 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 U8.16-201ENST00000391279 133 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 MIR1262-201ENST00000408276 93 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 RNA5SP425-201ENST00000410336 112 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 SNORA48.11-201ENST00000517015 89 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 AC015712.3-201ENST00000559380 164 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 MIR3199-1-201ENST00000582434 88 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 AP000753.3-201ENST00000604083 169 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 MAPK10-266ENST00000641066 6555 ntBASIC3.08□□□□□ -1.92
TRIM47Q96LD4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
TRIM47Q96LD4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRIM47Q96LD4 SNORA25.4-201ENST00000363666 124 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 U8.9-201ENST00000365667 134 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 MIR633-201ENST00000384821 98 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 SNORA26.7-201ENST00000391288 122 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 AC079150.2-201ENST00000443733 78 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 Z96811.1-201ENST00000445880 108 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 AC093850.1-201ENST00000454121 251 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 CYP2C59P-201ENST00000457790 269 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 RNU6-56P-201ENST00000516986 93 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 RNU6-667P-201ENST00000517186 102 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 MIR548AR-201ENST00000582191 57 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 MIR4536-1-201ENST00000583537 88 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 MIR8055-201ENST00000610739 97 ntBASIC3.07□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.354-201ENST00000365448 111 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 SNORA72.6-201ENST00000384520 129 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MIR452-201ENST00000385020 85 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MIR136-201ENST00000385207 82 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 RNU4-53P-201ENST00000410828 140 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 AC104332.2-201ENST00000429959 156 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MICF-203ENST00000432679 129 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 AC092628.1-201ENST00000436250 252 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MIR4648-201ENST00000580107 72 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MIR3064-201ENST00000581130 66 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 AC104996.3-201ENST00000590718 94 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 MIR6733-201ENST00000635723 61 ntBASIC3.06□□□□□ -1.92
TRIM47Q96LD4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM47Q96LD4 RNU6-330P-201ENST00000363015 107 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 RNU6-132P-201ENST00000383863 107 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 MIR764-201ENST00000390811 85 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 SNRPGP12-201ENST00000449481 213 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 AC005908.1-201ENST00000468701 347 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 AC023790.1-201ENST00000482174 347 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 AC108210.2-201ENST00000503681 201 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 AC090897.1-201ENST00000580909 226 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 UCA1.1-201ENST00000620952 75 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 MIR7157-201ENST00000635801 60 ntBASIC3.05□□□□□ -1.92
TRIM47Q96LD4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM47Q96LD4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM47Q96LD4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.99-201ENST00000363138 105 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 Y_RNA.443-201ENST00000384135 111 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 RNU6-160P-201ENST00000384591 107 ntBASIC3.04□□□□□ -1.92
TRIM47Q96LD4 RNU6-482P-201ENST00000391068 107 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms