Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
MS4A4AQ96JQ5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.41□□□□□ -1.86
MS4A4AQ96JQ5 MIR588-201ENST00000384900 83 ntBASIC3.41□□□□□ -1.86
MS4A4AQ96JQ5 MIR154-201ENST00000385243 84 ntBASIC3.41□□□□□ -1.86
MS4A4AQ96JQ5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
MS4A4AQ96JQ5 AC245517.4-201ENST00000448601 281 ntBASIC3.41□□□□□ -1.86
MS4A4AQ96JQ5 AC009474.2-201ENST00000451383 136 ntBASIC3.41□□□□□ -1.86
MS4A4AQ96JQ5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.41□□□□□ -1.86
MS4A4AQ96JQ5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
MS4A4AQ96JQ5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
MS4A4AQ96JQ5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
MS4A4AQ96JQ5 AC016717.2-201ENST00000609089 5141 ntBASIC3.4□□□□□ -1.86
MS4A4AQ96JQ5 RNU6-471P-201ENST00000383944 106 ntBASIC3.4□□□□□ -1.87
MS4A4AQ96JQ5 SNORA67.4-201ENST00000384688 142 ntBASIC3.4□□□□□ -1.87
MS4A4AQ96JQ5 RNA5SP501-201ENST00000410990 112 ntBASIC3.4□□□□□ -1.87
MS4A4AQ96JQ5 RNA5SP508-201ENST00000411327 119 ntBASIC3.4□□□□□ -1.87
MS4A4AQ96JQ5 AC093423.1-201ENST00000440817 142 ntBASIC3.4□□□□□ -1.87
MS4A4AQ96JQ5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.4□□□□□ -1.87
MS4A4AQ96JQ5 AC104027.1-201ENST00000521887 300 ntBASIC3.4□□□□□ -1.87
MS4A4AQ96JQ5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 Y_RNA.12-201ENST00000362393 112 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 RNU6-132P-201ENST00000383863 107 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 MIR516A2-201ENST00000384888 90 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 MIR516A1-201ENST00000385033 90 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 RNU6-360P-201ENST00000390944 104 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 ARF4P2-201ENST00000430209 526 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 AC005908.1-201ENST00000468701 347 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 RN7SL20P-201ENST00000488827 297 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 RNU7-41P-201ENST00000515917 61 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 RNU6-75P-201ENST00000515944 104 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MS4A4AQ96JQ5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MS4A4AQ96JQ5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MS4A4AQ96JQ5 RNU6-53P-201ENST00000365367 106 ntBASIC3.38□□□□□ -1.87
MS4A4AQ96JQ5 RNU6-540P-201ENST00000384622 101 ntBASIC3.38□□□□□ -1.87
MS4A4AQ96JQ5 MIR563-201ENST00000385080 79 ntBASIC3.38□□□□□ -1.87
MS4A4AQ96JQ5 AC107016.2-201ENST00000547968 190 ntBASIC3.38□□□□□ -1.87
MS4A4AQ96JQ5 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
MS4A4AQ96JQ5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 SNORA8.1-201ENST00000384250 140 ntBASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 MIR653-201ENST00000385279 96 ntBASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 AC244023.1-201ENST00000426884 112 ntBASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 AC242498.1-201ENST00000604134 111 ntBASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
MS4A4AQ96JQ5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 RNU6-1241P-201ENST00000384536 107 ntBASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 RNU6-987P-201ENST00000384759 104 ntBASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 MIR196B-201ENST00000384852 84 ntBASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 RNU6-663P-201ENST00000391105 106 ntBASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 AL513328.1-201ENST00000446460 224 ntBASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 SNORA31.15-201ENST00000516771 132 ntBASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 DEFB122-202ENST00000569013 197 ntBASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
MS4A4AQ96JQ5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 SNORA9.2-201ENST00000365361 133 ntBASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 RNU6-396P-201ENST00000365369 105 ntBASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 MIR518E-201ENST00000385252 88 ntBASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 Z98941.1-201ENST00000407764 100 ntBASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 AC003982.1-202ENST00000469928 248 ntBASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 RNU6-237P-201ENST00000515985 71 ntBASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 SNORD111.1-201ENST00000516421 86 ntBASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 MIR4264-201ENST00000583520 66 ntBASIC3.35□□□□□ -1.87
MS4A4AQ96JQ5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 AC093010.3-201ENST00000570269 15214 ntBASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 AL161722.3-201ENST00000605789 2983 ntBASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 MIR423-201ENST00000362201 94 ntBASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 RNU1-112P-201ENST00000364401 164 ntBASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 RNY4P3-201ENST00000365254 95 ntBASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 MIR9-1-201ENST00000385198 89 ntBASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 MIR887-201ENST00000401258 79 ntBASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 AL138878.1-201ENST00000405131 347 ntBASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MS4A4AQ96JQ5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
MS4A4AQ96JQ5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
MS4A4AQ96JQ5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.33□□□□□ -1.88
MS4A4AQ96JQ5 SNORA70B-201ENST00000384210 135 ntBASIC3.33□□□□□ -1.88
MS4A4AQ96JQ5 MT-TF-201ENST00000387314 71 ntBASIC3.33□□□□□ -1.88
MS4A4AQ96JQ5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
MS4A4AQ96JQ5 Z96811.1-201ENST00000445880 108 ntBASIC3.33□□□□□ -1.88
MS4A4AQ96JQ5 RNA5SP445-201ENST00000515889 115 ntBASIC3.33□□□□□ -1.88
MS4A4AQ96JQ5 MIR4644-201ENST00000579929 84 ntBASIC3.33□□□□□ -1.88
MS4A4AQ96JQ5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MS4A4AQ96JQ5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
MS4A4AQ96JQ5 Y_RNA.36-201ENST00000362602 112 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms