Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL023284.1-201ENST00000403956 276 ntBASIC3.42□□□□□ -1.86
VARS2Q5ST30 AC023141.11-201ENST00000508864 202 ntBASIC3.42□□□□□ -1.86
VARS2Q5ST30 RNU6-1194P-201ENST00000516208 104 ntBASIC3.42□□□□□ -1.86
VARS2Q5ST30 RNU6-542P-201ENST00000516405 103 ntBASIC3.42□□□□□ -1.86
VARS2Q5ST30 MIR2276-201ENST00000516886 89 ntBASIC3.42□□□□□ -1.86
VARS2Q5ST30 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.42□□□□□ -1.86
VARS2Q5ST30 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VARS2Q5ST30 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VARS2Q5ST30 MAPK10-362ENST00000641864 4484 ntBASIC3.42□□□□□ -1.86
VARS2Q5ST30 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VARS2Q5ST30 RNA5SP192-201ENST00000364404 120 ntBASIC3.41□□□□□ -1.86
VARS2Q5ST30 SNORD63B-201ENST00000411005 70 ntBASIC3.41□□□□□ -1.86
VARS2Q5ST30 RNU4-88P-201ENST00000411220 86 ntBASIC3.41□□□□□ -1.86
VARS2Q5ST30 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.41□□□□□ -1.86
VARS2Q5ST30 AC005786.1-201ENST00000588553 154 ntBASIC3.41□□□□□ -1.86
VARS2Q5ST30 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.41□□□□□ -1.86
VARS2Q5ST30 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.41□□□□□ -1.86
VARS2Q5ST30 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VARS2Q5ST30 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
VARS2Q5ST30 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.4□□□□□ -1.86
VARS2Q5ST30 RNU1-109P-201ENST00000383960 147 ntBASIC3.4□□□□□ -1.87
VARS2Q5ST30 SNORA7.4-201ENST00000384249 137 ntBASIC3.4□□□□□ -1.87
VARS2Q5ST30 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.4□□□□□ -1.87
VARS2Q5ST30 AL513423.1-201ENST00000621695 132 ntBASIC3.4□□□□□ -1.87
VARS2Q5ST30 MIR7153-201ENST00000637758 57 ntBASIC3.4□□□□□ -1.87
VARS2Q5ST30 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
VARS2Q5ST30 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
VARS2Q5ST30 snoU13.2-201ENST00000459201 104 ntBASIC3.39□□□□□ -1.87
VARS2Q5ST30 SCARNA16.3-201ENST00000516595 184 ntBASIC3.39□□□□□ -1.87
VARS2Q5ST30 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
VARS2Q5ST30 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VARS2Q5ST30 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
VARS2Q5ST30 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VARS2Q5ST30 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VARS2Q5ST30 MIR30E-201ENST00000362104 92 ntBASIC3.38□□□□□ -1.87
VARS2Q5ST30 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VARS2Q5ST30 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VARS2Q5ST30 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VARS2Q5ST30 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VARS2Q5ST30 Y_RNA.375-201ENST00000365625 101 ntBASIC3.37□□□□□ -1.87
VARS2Q5ST30 AC011753.1-201ENST00000451001 220 ntBASIC3.37□□□□□ -1.87
VARS2Q5ST30 AC008885.1-201ENST00000514930 301 ntBASIC3.37□□□□□ -1.87
VARS2Q5ST30 RNU11-2P-201ENST00000516898 142 ntBASIC3.37□□□□□ -1.87
VARS2Q5ST30 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.37□□□□□ -1.87
VARS2Q5ST30 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.37□□□□□ -1.87
VARS2Q5ST30 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VARS2Q5ST30 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VARS2Q5ST30 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.36□□□□□ -1.87
VARS2Q5ST30 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
VARS2Q5ST30 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
VARS2Q5ST30 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
VARS2Q5ST30 SNORA68.1-201ENST00000364537 132 ntBASIC3.36□□□□□ -1.87
VARS2Q5ST30 MIR563-201ENST00000385080 79 ntBASIC3.36□□□□□ -1.87
VARS2Q5ST30 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.36□□□□□ -1.87
VARS2Q5ST30 AC003685.2-201ENST00000422795 395 ntBASIC3.36□□□□□ -1.87
VARS2Q5ST30 AC092185.1-201ENST00000491371 97 ntBASIC3.36□□□□□ -1.87
VARS2Q5ST30 RNU6-982P-201ENST00000516216 102 ntBASIC3.36□□□□□ -1.87
VARS2Q5ST30 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.36□□□□□ -1.87
VARS2Q5ST30 MIR3162-201ENST00000581818 82 ntBASIC3.36□□□□□ -1.87
VARS2Q5ST30 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.36□□□□□ -1.87
VARS2Q5ST30 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
VARS2Q5ST30 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
VARS2Q5ST30 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
VARS2Q5ST30 RNU6-664P-201ENST00000362381 107 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 RNU6-1335P-201ENST00000365426 107 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 SNORA67.4-201ENST00000384688 142 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 MIR1261-201ENST00000408659 82 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.35□□□□□ -1.87
VARS2Q5ST30 RPS29P12-201ENST00000460178 152 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 RNA5SP445-201ENST00000515889 115 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 RNU6-752P-201ENST00000516376 102 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 MIR5094-201ENST00000578766 85 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 MIR4696-201ENST00000581431 70 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 SNORA4-201ENST00000584302 138 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 AC021506.2-201ENST00000612354 169 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 TRDV1-202ENST00000621643 102 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 MIR4251-201ENST00000635819 61 ntBASIC3.35□□□□□ -1.87
VARS2Q5ST30 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.35□□□□□ -1.87
VARS2Q5ST30 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VARS2Q5ST30 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VARS2Q5ST30 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
VARS2Q5ST30 AL606490.4-201ENST00000423117 127 ntBASIC3.34□□□□□ -1.87
VARS2Q5ST30 AC244023.1-201ENST00000426884 112 ntBASIC3.34□□□□□ -1.87
VARS2Q5ST30 MIR3935-201ENST00000583472 104 ntBASIC3.34□□□□□ -1.87
VARS2Q5ST30 AC242498.1-201ENST00000604134 111 ntBASIC3.34□□□□□ -1.87
VARS2Q5ST30 IST1-227ENST00000626438 126 ntTSL 5 BASIC3.34□□□□□ -1.87
VARS2Q5ST30 AC073476.4-201ENST00000628409 72 ntBASIC3.34□□□□□ -1.87
VARS2Q5ST30 MIR622-201ENST00000638396 96 ntBASIC3.34□□□□□ -1.87
VARS2Q5ST30 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VARS2Q5ST30 SNORA16B-201ENST00000364674 135 ntBASIC3.33□□□□□ -1.88
VARS2Q5ST30 SNORD101-201ENST00000384027 73 ntBASIC3.33□□□□□ -1.88
VARS2Q5ST30 SNORA54-201ENST00000384281 123 ntBASIC3.33□□□□□ -1.88
VARS2Q5ST30 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VARS2Q5ST30 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
VARS2Q5ST30 MIR4474-201ENST00000579189 78 ntBASIC3.33□□□□□ -1.88
VARS2Q5ST30 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VARS2Q5ST30 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VARS2Q5ST30 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VARS2Q5ST30 AL596028.1-201ENST00000326971 197 ntBASIC3.32□□□□□ -1.88
VARS2Q5ST30 SNORD15B-201ENST00000384714 146 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 638.7 ms