Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 MIR4251-201ENST00000635819 61 ntBASIC3.69□□□□□ -1.82
ATN1P54259 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
ATN1P54259 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
ATN1P54259 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATN1P54259 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
ATN1P54259 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.68□□□□□ -1.82
ATN1P54259 RNU6-668P-201ENST00000364180 107 ntBASIC3.68□□□□□ -1.82
ATN1P54259 RNA5SP139-201ENST00000364340 117 ntBASIC3.68□□□□□ -1.82
ATN1P54259 SNORD101-201ENST00000384027 73 ntBASIC3.68□□□□□ -1.82
ATN1P54259 HMGN2P35-201ENST00000412164 270 ntBASIC3.68□□□□□ -1.82
ATN1P54259 AC011753.1-201ENST00000451001 220 ntBASIC3.68□□□□□ -1.82
ATN1P54259 TRDV1-202ENST00000621643 102 ntBASIC3.68□□□□□ -1.82
ATN1P54259 AL161431.1-201ENST00000618966 4205 ntBASIC3.68□□□□□ -1.82
ATN1P54259 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATN1P54259 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATN1P54259 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.67□□□□□ -1.82
ATN1P54259 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATN1P54259 MIR563-201ENST00000385080 79 ntBASIC3.67□□□□□ -1.82
ATN1P54259 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
ATN1P54259 AC021506.2-201ENST00000612354 169 ntBASIC3.67□□□□□ -1.82
ATN1P54259 RNVU1-4-201ENST00000612985 164 ntBASIC3.67□□□□□ -1.82
ATN1P54259 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATN1P54259 AC016717.2-201ENST00000609089 5141 ntBASIC3.66□□□□□ -1.82
ATN1P54259 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATN1P54259 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
ATN1P54259 RNA5SP42-201ENST00000364278 115 ntBASIC3.66□□□□□ -1.82
ATN1P54259 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ATN1P54259 AC244023.1-201ENST00000426884 112 ntBASIC3.66□□□□□ -1.82
ATN1P54259 RNU6-274P-201ENST00000459566 107 ntBASIC3.66□□□□□ -1.82
ATN1P54259 RPS29P12-201ENST00000460178 152 ntBASIC3.66□□□□□ -1.82
ATN1P54259 AC008885.1-201ENST00000514930 301 ntBASIC3.66□□□□□ -1.82
ATN1P54259 RNU6-982P-201ENST00000516216 102 ntBASIC3.66□□□□□ -1.82
ATN1P54259 RNA5SP137-201ENST00000516833 135 ntBASIC3.66□□□□□ -1.82
ATN1P54259 AC242498.1-201ENST00000604134 111 ntBASIC3.66□□□□□ -1.82
ATN1P54259 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.66□□□□□ -1.82
ATN1P54259 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATN1P54259 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATN1P54259 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATN1P54259 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ATN1P54259 MIR588-201ENST00000384900 83 ntBASIC3.65□□□□□ -1.83
ATN1P54259 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.65□□□□□ -1.83
ATN1P54259 MIR3938-201ENST00000582157 103 ntBASIC3.65□□□□□ -1.83
ATN1P54259 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATN1P54259 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATN1P54259 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.65□□□□□ -1.83
ATN1P54259 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
ATN1P54259 RNA5SP432-201ENST00000362480 116 ntBASIC3.64□□□□□ -1.83
ATN1P54259 RNU1-70P-201ENST00000362618 164 ntBASIC3.64□□□□□ -1.83
ATN1P54259 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.64□□□□□ -1.83
ATN1P54259 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.64□□□□□ -1.83
ATN1P54259 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
ATN1P54259 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.64□□□□□ -1.83
ATN1P54259 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.64□□□□□ -1.83
ATN1P54259 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATN1P54259 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATN1P54259 RNU1-58P-201ENST00000362413 163 ntBASIC3.63□□□□□ -1.83
ATN1P54259 RNU4-58P-201ENST00000363192 141 ntBASIC3.63□□□□□ -1.83
ATN1P54259 MIR519A1-201ENST00000385257 85 ntBASIC3.63□□□□□ -1.83
ATN1P54259 RNA5SP445-201ENST00000515889 115 ntBASIC3.63□□□□□ -1.83
ATN1P54259 SCARNA21.1-201ENST00000515996 128 ntBASIC3.63□□□□□ -1.83
ATN1P54259 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATN1P54259 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATN1P54259 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.63□□□□□ -1.83
ATN1P54259 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ATN1P54259 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATN1P54259 AL596028.1-201ENST00000326971 197 ntBASIC3.62□□□□□ -1.83
ATN1P54259 RNU6-53P-201ENST00000365367 106 ntBASIC3.62□□□□□ -1.83
ATN1P54259 Y_RNA.379-201ENST00000365653 102 ntBASIC3.62□□□□□ -1.83
ATN1P54259 AL606490.4-201ENST00000423117 127 ntBASIC3.62□□□□□ -1.83
ATN1P54259 RNU6-711P-201ENST00000517255 106 ntBASIC3.62□□□□□ -1.83
ATN1P54259 AC026333.2-201ENST00000542164 106 ntBASIC3.62□□□□□ -1.83
ATN1P54259 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATN1P54259 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATN1P54259 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATN1P54259 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.61□□□□□ -1.83
ATN1P54259 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATN1P54259 RNA5SP295-201ENST00000362655 121 ntBASIC3.61□□□□□ -1.83
ATN1P54259 AC244098.3-201ENST00000424803 96 ntBASIC3.61□□□□□ -1.83
ATN1P54259 RNU7-195P-201ENST00000458793 62 ntBASIC3.61□□□□□ -1.83
ATN1P54259 RNA5SP356-201ENST00000515972 94 ntBASIC3.61□□□□□ -1.83
ATN1P54259 MIR3920-201ENST00000581751 86 ntBASIC3.61□□□□□ -1.83
ATN1P54259 MIR3945-201ENST00000581853 98 ntBASIC3.61□□□□□ -1.83
ATN1P54259 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.61□□□□□ -1.83
ATN1P54259 AC007318.2-201ENST00000620999 243 ntBASIC3.61□□□□□ -1.83
ATN1P54259 IST1-227ENST00000626438 126 ntTSL 5 BASIC3.61□□□□□ -1.83
ATN1P54259 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATN1P54259 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.6□□□□□ -1.83
ATN1P54259 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATN1P54259 MIR591-201ENST00000385290 95 ntBASIC3.6□□□□□ -1.83
ATN1P54259 RNU6-220P-201ENST00000390919 107 ntBASIC3.6□□□□□ -1.83
ATN1P54259 RNU6-531P-201ENST00000516694 104 ntBASIC3.6□□□□□ -1.83
ATN1P54259 GTF3AP2-201ENST00000557014 266 ntBASIC3.6□□□□□ -1.83
ATN1P54259 SUB1P4-201ENST00000566062 339 ntBASIC3.6□□□□□ -1.83
ATN1P54259 MIR4709-201ENST00000577272 72 ntBASIC3.6□□□□□ -1.83
ATN1P54259 MTRNR2L2-201ENST00000604882 87 ntBASIC3.6□□□□□ -1.83
ATN1P54259 MIR4773-1-201ENST00000637203 78 ntBASIC3.6□□□□□ -1.83
ATN1P54259 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATN1P54259 MIR30D-201ENST00000362283 70 ntBASIC3.59□□□□□ -1.83
ATN1P54259 RNU6-461P-201ENST00000364195 107 ntBASIC3.59□□□□□ -1.83
ATN1P54259 MIR184-201ENST00000384962 84 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 249.5 ms