Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MICF-203ENST00000432679 129 ntBASIC3.07□□□□□ -1.92
GFRA3O60609 SNORD109B-201ENST00000458961 67 ntBASIC3.07□□□□□ -1.92
GFRA3O60609 SNORD109A-201ENST00000459128 67 ntBASIC3.07□□□□□ -1.92
GFRA3O60609 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.07□□□□□ -1.92
GFRA3O60609 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.07□□□□□ -1.92
GFRA3O60609 uc_338.32-201ENST00000615087 172 ntBASIC3.07□□□□□ -1.92
GFRA3O60609 AP000648.3-201ENST00000623539 4507 ntBASIC3.07□□□□□ -1.92
GFRA3O60609 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GFRA3O60609 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
GFRA3O60609 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
GFRA3O60609 Y_RNA.99-201ENST00000363138 105 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 MIR218-1-201ENST00000384999 110 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 FO393413.1-201ENST00000402892 195 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 AL138878.1-201ENST00000405131 347 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 AL034345.1-201ENST00000407768 123 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 RHEBP3-201ENST00000411920 351 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 RPS27P16-201ENST00000425758 201 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 AC087499.2-201ENST00000432861 149 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 RNU6-1194P-201ENST00000516208 104 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 MIR548AO-201ENST00000579992 96 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 MIR4696-201ENST00000581431 70 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.06□□□□□ -1.92
GFRA3O60609 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
GFRA3O60609 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
GFRA3O60609 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
GFRA3O60609 MIR22-201ENST00000362190 85 ntBASIC3.05□□□□□ -1.92
GFRA3O60609 RNU1-70P-201ENST00000362618 164 ntBASIC3.05□□□□□ -1.92
GFRA3O60609 RNA5SP167-201ENST00000365461 116 ntBASIC3.05□□□□□ -1.92
GFRA3O60609 SNORD38B-201ENST00000384690 67 ntBASIC3.05□□□□□ -1.92
GFRA3O60609 AL606490.4-201ENST00000423117 127 ntBASIC3.05□□□□□ -1.92
GFRA3O60609 AC022513.1-201ENST00000624512 117 ntBASIC3.05□□□□□ -1.92
GFRA3O60609 SNORD38B-202ENST00000625943 69 ntBASIC3.05□□□□□ -1.92
GFRA3O60609 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GFRA3O60609 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
GFRA3O60609 ZNF658B-202ENST00000615961 3375 ntBASIC3.04□□□□□ -1.92
GFRA3O60609 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
GFRA3O60609 RNU6-654P-201ENST00000364373 107 ntBASIC3.04□□□□□ -1.92
GFRA3O60609 RNU6-1072P-201ENST00000384703 107 ntBASIC3.04□□□□□ -1.92
GFRA3O60609 RNU6-443P-201ENST00000384780 107 ntBASIC3.04□□□□□ -1.92
GFRA3O60609 SNORD63B-201ENST00000411005 70 ntBASIC3.04□□□□□ -1.92
GFRA3O60609 SCARNA11.3-201ENST00000517276 130 ntBASIC3.04□□□□□ -1.92
GFRA3O60609 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
GFRA3O60609 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GFRA3O60609 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
GFRA3O60609 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
GFRA3O60609 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
GFRA3O60609 RNU6-664P-201ENST00000362381 107 ntBASIC3.03□□□□□ -1.92
GFRA3O60609 RNU1-105P-201ENST00000363470 161 ntBASIC3.03□□□□□ -1.92
GFRA3O60609 RNA5SP493-201ENST00000364115 91 ntBASIC3.03□□□□□ -1.92
GFRA3O60609 RNA5SP42-201ENST00000364278 115 ntBASIC3.03□□□□□ -1.92
GFRA3O60609 Y_RNA.338-201ENST00000365320 114 ntBASIC3.03□□□□□ -1.92
GFRA3O60609 RNU6-35P-201ENST00000384530 107 ntBASIC3.03□□□□□ -1.92
GFRA3O60609 SNORA3.2-201ENST00000408221 125 ntBASIC3.03□□□□□ -1.92
GFRA3O60609 MTND4LP1-201ENST00000446263 157 ntBASIC3.03□□□□□ -1.92
GFRA3O60609 CYP2C59P-201ENST00000457790 269 ntBASIC3.03□□□□□ -1.92
GFRA3O60609 MIR548AD-201ENST00000584780 82 ntBASIC3.03□□□□□ -1.92
GFRA3O60609 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.03□□□□□ -1.92
GFRA3O60609 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GFRA3O60609 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GFRA3O60609 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GFRA3O60609 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GFRA3O60609 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
GFRA3O60609 MIR1287-201ENST00000408492 90 ntBASIC3.02□□□□□ -1.93
GFRA3O60609 RNU6-752P-201ENST00000516376 102 ntBASIC3.02□□□□□ -1.93
GFRA3O60609 RNU11-2P-201ENST00000516898 142 ntBASIC3.02□□□□□ -1.93
GFRA3O60609 MIR3169-201ENST00000578032 83 ntBASIC3.02□□□□□ -1.93
GFRA3O60609 uc_338.1-201ENST00000612113 180 ntBASIC3.02□□□□□ -1.93
GFRA3O60609 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
GFRA3O60609 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GFRA3O60609 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GFRA3O60609 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GFRA3O60609 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
GFRA3O60609 MIR1289-2-201ENST00000408360 111 ntBASIC3.01□□□□□ -1.93
GFRA3O60609 RNU6-1052P-201ENST00000411398 104 ntBASIC3.01□□□□□ -1.93
GFRA3O60609 AC006539.3-201ENST00000454258 129 ntBASIC3.01□□□□□ -1.93
GFRA3O60609 RNU6-719P-201ENST00000516671 104 ntBASIC3.01□□□□□ -1.93
GFRA3O60609 RNU6-980P-201ENST00000516925 103 ntBASIC3.01□□□□□ -1.93
GFRA3O60609 uc_338.10-201ENST00000621872 182 ntBASIC3.01□□□□□ -1.93
GFRA3O60609 AC008133.2-201ENST00000624540 351 ntBASIC3.01□□□□□ -1.93
GFRA3O60609 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GFRA3O60609 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GFRA3O60609 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
GFRA3O60609 5S_rRNA.2-201ENST00000391293 112 ntBASIC3□□□□□ -1.93
GFRA3O60609 Z98941.1-201ENST00000407764 100 ntBASIC3□□□□□ -1.93
GFRA3O60609 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3□□□□□ -1.93
GFRA3O60609 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3□□□□□ -1.93
GFRA3O60609 RNA5SP445-201ENST00000515889 115 ntBASIC3□□□□□ -1.93
GFRA3O60609 MIR4738-201ENST00000579134 87 ntBASIC3□□□□□ -1.93
GFRA3O60609 MIR4644-201ENST00000579929 84 ntBASIC3□□□□□ -1.93
GFRA3O60609 AC007318.2-201ENST00000620999 243 ntBASIC3□□□□□ -1.93
GFRA3O60609 TRDV1-202ENST00000621643 102 ntBASIC3□□□□□ -1.93
GFRA3O60609 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3□□□□□ -1.93
GFRA3O60609 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3□□□□□ -1.93
GFRA3O60609 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3□□□□□ -1.93
GFRA3O60609 AC023934.1-201ENST00000574529 2389 ntBASIC3□□□□□ -1.93
GFRA3O60609 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
GFRA3O60609 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.99□□□□□ -1.93
GFRA3O60609 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
GFRA3O60609 Y_RNA.258-201ENST00000364613 105 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms