Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RYDENQ9NUL5 MIR34B-201ENST00000385076 84 ntBASIC3.2□□□□□ -1.9
RYDENQ9NUL5 RNU6-1165P-201ENST00000410119 107 ntBASIC3.2□□□□□ -1.9
RYDENQ9NUL5 RNU7-62P-201ENST00000458856 62 ntBASIC3.2□□□□□ -1.9
RYDENQ9NUL5 RN7SL293P-201ENST00000481765 281 ntBASIC3.2□□□□□ -1.9
RYDENQ9NUL5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.2□□□□□ -1.9
RYDENQ9NUL5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RYDENQ9NUL5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.19□□□□□ -1.9
RYDENQ9NUL5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RYDENQ9NUL5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RYDENQ9NUL5 AL357312.1-201ENST00000603879 298 ntBASIC3.19□□□□□ -1.9
RYDENQ9NUL5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.19□□□□□ -1.9
RYDENQ9NUL5 MIR7975-201ENST00000619350 68 ntBASIC3.19□□□□□ -1.9
RYDENQ9NUL5 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
RYDENQ9NUL5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.19□□□□□ -1.9
RYDENQ9NUL5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYDENQ9NUL5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RYDENQ9NUL5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RYDENQ9NUL5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RYDENQ9NUL5 MIR183-201ENST00000384958 110 ntBASIC3.18□□□□□ -1.9
RYDENQ9NUL5 SNORD23.1-201ENST00000408212 104 ntBASIC3.18□□□□□ -1.9
RYDENQ9NUL5 HSPE1P24-201ENST00000450782 238 ntBASIC3.18□□□□□ -1.9
RYDENQ9NUL5 SNORA25.13-201ENST00000516395 103 ntBASIC3.18□□□□□ -1.9
RYDENQ9NUL5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RYDENQ9NUL5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.17□□□□□ -1.9
RYDENQ9NUL5 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
RYDENQ9NUL5 SNORA70.4-201ENST00000365509 134 ntBASIC3.17□□□□□ -1.9
RYDENQ9NUL5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RYDENQ9NUL5 MIR30D-201ENST00000362283 70 ntBASIC3.16□□□□□ -1.9
RYDENQ9NUL5 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.16□□□□□ -1.9
RYDENQ9NUL5 SNORD17-201ENST00000390930 237 ntBASIC3.16□□□□□ -1.9
RYDENQ9NUL5 RNU4-47P-201ENST00000410876 114 ntBASIC3.16□□□□□ -1.9
RYDENQ9NUL5 RNU7-85P-201ENST00000458851 63 ntBASIC3.16□□□□□ -1.9
RYDENQ9NUL5 MIR4264-201ENST00000583520 66 ntBASIC3.16□□□□□ -1.9
RYDENQ9NUL5 RNVU1-4-201ENST00000612985 164 ntBASIC3.16□□□□□ -1.9
RYDENQ9NUL5 uc_338.6-201ENST00000613544 171 ntBASIC3.16□□□□□ -1.9
RYDENQ9NUL5 U6.105-201ENST00000637379 88 ntBASIC3.16□□□□□ -1.9
RYDENQ9NUL5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RYDENQ9NUL5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RYDENQ9NUL5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.15□□□□□ -1.9
RYDENQ9NUL5 MIR563-201ENST00000385080 79 ntBASIC3.15□□□□□ -1.91
RYDENQ9NUL5 RNA5SP95-201ENST00000410319 137 ntBASIC3.15□□□□□ -1.91
RYDENQ9NUL5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.15□□□□□ -1.91
RYDENQ9NUL5 AL450471.1-201ENST00000447509 127 ntBASIC3.15□□□□□ -1.91
RYDENQ9NUL5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.15□□□□□ -1.91
RYDENQ9NUL5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.15□□□□□ -1.91
RYDENQ9NUL5 MIR4738-201ENST00000579134 87 ntBASIC3.15□□□□□ -1.91
RYDENQ9NUL5 GHRLOS.1-201ENST00000610995 70 ntBASIC3.15□□□□□ -1.91
RYDENQ9NUL5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RYDENQ9NUL5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RYDENQ9NUL5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RYDENQ9NUL5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RYDENQ9NUL5 SNORA72.6-201ENST00000384520 129 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 RNU6-129P-201ENST00000391022 107 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 RNA5SP212-201ENST00000391223 107 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 snoU13.11-201ENST00000459219 104 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 RN7SL442P-201ENST00000473804 320 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 MIR2115-201ENST00000516657 100 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 GTF3AP2-201ENST00000557014 266 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 AL512598.1-201ENST00000610158 273 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 AC245884.12-201ENST00000615364 59 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 MIR8063-201ENST00000621930 81 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 AC073476.4-201ENST00000628409 72 ntBASIC3.14□□□□□ -1.91
RYDENQ9NUL5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RYDENQ9NUL5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RYDENQ9NUL5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RYDENQ9NUL5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RYDENQ9NUL5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RYDENQ9NUL5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RYDENQ9NUL5 MIR208A-201ENST00000362287 71 ntBASIC3.13□□□□□ -1.91
RYDENQ9NUL5 SNORA71.3-201ENST00000362582 128 ntBASIC3.13□□□□□ -1.91
RYDENQ9NUL5 RNU6-571P-201ENST00000384128 107 ntBASIC3.13□□□□□ -1.91
RYDENQ9NUL5 Y_RNA.508-201ENST00000384502 114 ntBASIC3.13□□□□□ -1.91
RYDENQ9NUL5 Y_RNA.565-201ENST00000384719 101 ntBASIC3.13□□□□□ -1.91
RYDENQ9NUL5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RYDENQ9NUL5 SNORA11.1-201ENST00000408133 129 ntBASIC3.13□□□□□ -1.91
RYDENQ9NUL5 AC245517.4-201ENST00000448601 281 ntBASIC3.13□□□□□ -1.91
RYDENQ9NUL5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.13□□□□□ -1.91
RYDENQ9NUL5 snoU13.25-201ENST00000458945 104 ntBASIC3.13□□□□□ -1.91
RYDENQ9NUL5 IGKV2-26-201ENST00000518305 343 ntBASIC3.13□□□□□ -1.91
RYDENQ9NUL5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RYDENQ9NUL5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RYDENQ9NUL5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RYDENQ9NUL5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RYDENQ9NUL5 SNORA63.1-201ENST00000362493 131 ntBASIC3.12□□□□□ -1.91
RYDENQ9NUL5 RNU4-35P-201ENST00000362588 141 ntBASIC3.12□□□□□ -1.91
RYDENQ9NUL5 MIR516A2-201ENST00000384888 90 ntBASIC3.12□□□□□ -1.91
RYDENQ9NUL5 MIR516A1-201ENST00000385033 90 ntBASIC3.12□□□□□ -1.91
RYDENQ9NUL5 AP004217.1-201ENST00000480579 346 ntBASIC3.12□□□□□ -1.91
RYDENQ9NUL5 RN7SL274P-201ENST00000492268 272 ntBASIC3.12□□□□□ -1.91
RYDENQ9NUL5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.12□□□□□ -1.91
RYDENQ9NUL5 MIR7153-201ENST00000637758 57 ntBASIC3.12□□□□□ -1.91
RYDENQ9NUL5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RYDENQ9NUL5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.11□□□□□ -1.91
RYDENQ9NUL5 MIR524-201ENST00000385242 87 ntBASIC3.11□□□□□ -1.91
RYDENQ9NUL5 MIR4425-201ENST00000580572 84 ntBASIC3.11□□□□□ -1.91
RYDENQ9NUL5 AL161756.2-201ENST00000604597 246 ntBASIC3.11□□□□□ -1.91
RYDENQ9NUL5 AC012314.7-201ENST00000619693 93 ntBASIC3.11□□□□□ -1.91
RYDENQ9NUL5 U4.6-201ENST00000621618 127 ntBASIC3.11□□□□□ -1.91
RYDENQ9NUL5 MIR6516-201ENST00000630554 81 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 2009.6 ms