Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 UBE2V2P2-201ENST00000587677 504 ntBASIC-3.66□□□□□ -3
SMCO4Q9NRQ5 Y_RNA.175-201ENST00000363794 111 ntBASIC-3.67□□□□□ -3
SMCO4Q9NRQ5 Y_RNA.190-201ENST00000363964 101 ntBASIC-3.67□□□□□ -3
SMCO4Q9NRQ5 RNU6-1329P-201ENST00000365664 107 ntBASIC-3.67□□□□□ -3
SMCO4Q9NRQ5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-3.67□□□□□ -3
SMCO4Q9NRQ5 RNU6-168P-201ENST00000516189 101 ntBASIC-3.67□□□□□ -3
SMCO4Q9NRQ5 RNU6-1028P-201ENST00000517164 93 ntBASIC-3.67□□□□□ -3
SMCO4Q9NRQ5 MIR2681-201ENST00000581814 105 ntBASIC-3.67□□□□□ -3
SMCO4Q9NRQ5 RNU5B-4P-201ENST00000363508 111 ntBASIC-3.68□□□□□ -3
SMCO4Q9NRQ5 RNU6-933P-201ENST00000384424 107 ntBASIC-3.68□□□□□ -3
SMCO4Q9NRQ5 RNU6-429P-201ENST00000384582 108 ntBASIC-3.68□□□□□ -3
SMCO4Q9NRQ5 RNU2-61P-201ENST00000411069 191 ntBASIC-3.68□□□□□ -3
SMCO4Q9NRQ5 MIR2113-201ENST00000459007 91 ntBASIC-3.68□□□□□ -3
SMCO4Q9NRQ5 RNU6-1114P-201ENST00000516022 107 ntBASIC-3.68□□□□□ -3
SMCO4Q9NRQ5 MIR4703-201ENST00000577728 79 ntBASIC-3.68□□□□□ -3
SMCO4Q9NRQ5 AC006386.1-201ENST00000619436 415 ntBASIC-3.68□□□□□ -3
SMCO4Q9NRQ5 Y_RNA.577-201ENST00000384794 101 ntBASIC-3.69□□□□□ -3
SMCO4Q9NRQ5 AL359881.1-201ENST00000602916 267 ntBASIC-3.69□□□□□ -3
SMCO4Q9NRQ5 AC098479.1-201ENST00000609225 154 ntBASIC-3.69□□□□□ -3
SMCO4Q9NRQ5 MIR302B-201ENST00000362188 73 ntBASIC-3.7□□□□□ -3
SMCO4Q9NRQ5 Y_RNA.5-201ENST00000362334 102 ntBASIC-3.7□□□□□ -3
SMCO4Q9NRQ5 Y_RNA.97-201ENST00000363094 102 ntBASIC-3.7□□□□□ -3
SMCO4Q9NRQ5 SNORA51.5-201ENST00000384126 131 ntBASIC-3.7□□□□□ -3
SMCO4Q9NRQ5 MIR519A1-201ENST00000385257 85 ntBASIC-3.7□□□□□ -3
SMCO4Q9NRQ5 AL031003.1-201ENST00000404229 172 ntBASIC-3.7□□□□□ -3
SMCO4Q9NRQ5 RNU6-625P-201ENST00000459412 107 ntBASIC-3.7□□□□□ -3
SMCO4Q9NRQ5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-3.7□□□□□ -3
SMCO4Q9NRQ5 AC006927.2-201ENST00000639256 389 ntBASIC-3.7□□□□□ -3
SMCO4Q9NRQ5 RNU6-208P-201ENST00000362431 107 ntBASIC-3.71□□□□□ -3
SMCO4Q9NRQ5 RNU6-524P-201ENST00000384270 107 ntBASIC-3.71□□□□□ -3
SMCO4Q9NRQ5 RNU6-337P-201ENST00000391243 106 ntBASIC-3.71□□□□□ -3
SMCO4Q9NRQ5 TPTE2P5-203ENST00000458118 728 ntBASIC-3.71□□□□□ -3
SMCO4Q9NRQ5 Y_RNA.809-201ENST00000516058 95 ntBASIC-3.71□□□□□ -3
SMCO4Q9NRQ5 SNORD36C-201ENST00000516733 66 ntBASIC-3.71□□□□□ -3
SMCO4Q9NRQ5 RNU6-169P-201ENST00000365336 107 ntBASIC-3.72□□□□□ -3
SMCO4Q9NRQ5 BX295541.1-201ENST00000417774 250 ntBASIC-3.72□□□□□ -3
SMCO4Q9NRQ5 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-3.72□□□□□ -3
SMCO4Q9NRQ5 AL008718.3-201ENST00000610217 321 ntBASIC-3.72□□□□□ -3
SMCO4Q9NRQ5 RNU6-1260P-201ENST00000362944 107 ntBASIC-3.73□□□□□ -3.01
SMCO4Q9NRQ5 RNA5SP405-201ENST00000363059 114 ntBASIC-3.73□□□□□ -3.01
SMCO4Q9NRQ5 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.73□□□□□ -3.01
SMCO4Q9NRQ5 MIR3139-201ENST00000579145 76 ntBASIC-3.73□□□□□ -3.01
SMCO4Q9NRQ5 AP001542.1-201ENST00000591314 200 ntBASIC-3.73□□□□□ -3.01
SMCO4Q9NRQ5 MIR6888-201ENST00000621977 67 ntBASIC-3.73□□□□□ -3.01
SMCO4Q9NRQ5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-3.74□□□□□ -3.01
SMCO4Q9NRQ5 MTND2P30-201ENST00000456663 382 ntBASIC-3.74□□□□□ -3.01
SMCO4Q9NRQ5 AC116353.3-201ENST00000511215 249 ntBASIC-3.74□□□□□ -3.01
SMCO4Q9NRQ5 SNORD27.1-201ENST00000516319 72 ntBASIC-3.74□□□□□ -3.01
SMCO4Q9NRQ5 AC103705.1-201ENST00000619013 241 ntBASIC-3.74□□□□□ -3.01
SMCO4Q9NRQ5 MIR342-201ENST00000362212 99 ntBASIC-3.75□□□□□ -3.01
SMCO4Q9NRQ5 SNORD115-22-201ENST00000364456 82 ntBASIC-3.75□□□□□ -3.01
SMCO4Q9NRQ5 RNU6-1310P-201ENST00000384153 107 ntBASIC-3.75□□□□□ -3.01
SMCO4Q9NRQ5 UBE2V1P12-201ENST00000503954 474 ntBASIC-3.75□□□□□ -3.01
SMCO4Q9NRQ5 AC016550.1-201ENST00000505348 785 ntBASIC-3.75□□□□□ -3.01
SMCO4Q9NRQ5 RNU7-79P-201ENST00000516082 62 ntBASIC-3.75□□□□□ -3.01
SMCO4Q9NRQ5 RNU6-553P-201ENST00000364047 96 ntBASIC-3.76□□□□□ -3.01
SMCO4Q9NRQ5 Y_RNA.665-201ENST00000516177 98 ntBASIC-3.76□□□□□ -3.01
SMCO4Q9NRQ5 RNU4-10P-201ENST00000364383 140 ntBASIC-3.77□□□□□ -3.01
SMCO4Q9NRQ5 Y_RNA.366-201ENST00000365540 102 ntBASIC-3.77□□□□□ -3.01
SMCO4Q9NRQ5 RNU6-1145P-201ENST00000384246 107 ntBASIC-3.77□□□□□ -3.01
SMCO4Q9NRQ5 MTND2P3-201ENST00000452458 470 ntBASIC-3.77□□□□□ -3.01
SMCO4Q9NRQ5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-3.77□□□□□ -3.01
SMCO4Q9NRQ5 RNU7-195P-201ENST00000458793 62 ntBASIC-3.77□□□□□ -3.01
SMCO4Q9NRQ5 SNORD11-201ENST00000459124 84 ntBASIC-3.77□□□□□ -3.01
SMCO4Q9NRQ5 AC122108.2-201ENST00000611946 526 ntBASIC-3.77□□□□□ -3.01
SMCO4Q9NRQ5 RNU6-533P-201ENST00000384144 107 ntBASIC-3.78□□□□□ -3.01
SMCO4Q9NRQ5 RNU4-70P-201ENST00000384579 139 ntBASIC-3.78□□□□□ -3.01
SMCO4Q9NRQ5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-3.78□□□□□ -3.01
SMCO4Q9NRQ5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-3.79□□□□□ -3.02
SMCO4Q9NRQ5 AL353691.2-201ENST00000443795 59 ntBASIC-3.79□□□□□ -3.02
SMCO4Q9NRQ5 AP003357.1-201ENST00000604497 148 ntBASIC-3.79□□□□□ -3.02
SMCO4Q9NRQ5 AL669831.3-213ENST00000636676 183 ntBASIC-3.79□□□□□ -3.02
SMCO4Q9NRQ5 MIR6841-201ENST00000637129 72 ntBASIC-3.79□□□□□ -3.02
SMCO4Q9NRQ5 Y_RNA.432-201ENST00000384087 111 ntBASIC-3.8□□□□□ -3.02
SMCO4Q9NRQ5 USP9YP23-201ENST00000455085 407 ntBASIC-3.8□□□□□ -3.02
SMCO4Q9NRQ5 SNORD54-201ENST00000459159 67 ntBASIC-3.8□□□□□ -3.02
SMCO4Q9NRQ5 RNU6-397P-201ENST00000516226 104 ntBASIC-3.8□□□□□ -3.02
SMCO4Q9NRQ5 RNU6-1258P-201ENST00000516911 111 ntBASIC-3.8□□□□□ -3.02
SMCO4Q9NRQ5 RNU2-31P-201ENST00000516954 155 ntBASIC-3.8□□□□□ -3.02
SMCO4Q9NRQ5 RNU6-1006P-201ENST00000516998 103 ntBASIC-3.8□□□□□ -3.02
SMCO4Q9NRQ5 AC016911.1-201ENST00000613297 452 ntBASIC-3.8□□□□□ -3.02
SMCO4Q9NRQ5 Y_RNA.71-201ENST00000362892 104 ntBASIC-3.81□□□□□ -3.02
SMCO4Q9NRQ5 RNU6-924P-201ENST00000362926 108 ntBASIC-3.81□□□□□ -3.02
SMCO4Q9NRQ5 RNU6-194P-201ENST00000363862 105 ntBASIC-3.81□□□□□ -3.02
SMCO4Q9NRQ5 Y_RNA.239-201ENST00000364444 113 ntBASIC-3.81□□□□□ -3.02
SMCO4Q9NRQ5 MIR548H3-201ENST00000408771 118 ntBASIC-3.81□□□□□ -3.02
SMCO4Q9NRQ5 AL357078.3-201ENST00000607528 618 ntBASIC-3.81□□□□□ -3.02
SMCO4Q9NRQ5 RNU5F-6P-201ENST00000362979 116 ntBASIC-3.82□□□□□ -3.02
SMCO4Q9NRQ5 Y_RNA.436-201ENST00000384097 102 ntBASIC-3.82□□□□□ -3.02
SMCO4Q9NRQ5 RNU6-413P-201ENST00000384115 107 ntBASIC-3.82□□□□□ -3.02
SMCO4Q9NRQ5 MIR1278-201ENST00000408753 81 ntBASIC-3.82□□□□□ -3.02
SMCO4Q9NRQ5 SEPT14P4-201ENST00000513445 186 ntBASIC-3.82□□□□□ -3.02
SMCO4Q9NRQ5 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-3.82□□□□□ -3.02
SMCO4Q9NRQ5 SNORA22.1-201ENST00000362701 134 ntBASIC-3.83□□□□□ -3.02
SMCO4Q9NRQ5 Y_RNA.293-201ENST00000364908 93 ntBASIC-3.83□□□□□ -3.02
SMCO4Q9NRQ5 Y_RNA.353-201ENST00000365440 108 ntBASIC-3.83□□□□□ -3.02
SMCO4Q9NRQ5 RNU6-74P-201ENST00000384235 107 ntBASIC-3.83□□□□□ -3.02
SMCO4Q9NRQ5 SNORA20-201ENST00000384662 132 ntBASIC-3.83□□□□□ -3.02
SMCO4Q9NRQ5 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.83□□□□□ -3.02
SMCO4Q9NRQ5 RNU6-287P-201ENST00000516230 98 ntBASIC-3.83□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms