Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 RNU1-132P-201ENST00000364300 164 ntBASIC1.47□□□□□ -2.17
LCE4AQ5TA78 RNU6-1047P-201ENST00000364418 107 ntBASIC1.47□□□□□ -2.17
LCE4AQ5TA78 SNORD1A-201ENST00000364968 72 ntBASIC1.47□□□□□ -2.17
LCE4AQ5TA78 MIR548AA1-201ENST00000384971 97 ntBASIC1.47□□□□□ -2.17
LCE4AQ5TA78 MIR548E-201ENST00000408287 88 ntBASIC1.47□□□□□ -2.17
LCE4AQ5TA78 MRPS21P3-201ENST00000436696 262 ntBASIC1.47□□□□□ -2.17
LCE4AQ5TA78 SNORA31.17-201ENST00000516953 127 ntBASIC1.47□□□□□ -2.17
LCE4AQ5TA78 MIR7853-201ENST00000584820 132 ntBASIC1.47□□□□□ -2.17
LCE4AQ5TA78 MIR6867-201ENST00000610636 67 ntBASIC1.47□□□□□ -2.17
LCE4AQ5TA78 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
LCE4AQ5TA78 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
LCE4AQ5TA78 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
LCE4AQ5TA78 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LCE4AQ5TA78 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.47□□□□□ -2.17
LCE4AQ5TA78 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
LCE4AQ5TA78 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LCE4AQ5TA78 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LCE4AQ5TA78 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC1.47□□□□□ -2.17
LCE4AQ5TA78 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.17
LCE4AQ5TA78 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 Y_RNA.139-201ENST00000363464 102 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 Y_RNA.500-201ENST00000384466 111 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 RNU1-148P-201ENST00000384472 162 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 RNU1-82P-201ENST00000390851 165 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 MIR1255B2-201ENST00000408618 67 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 RPS29P7-201ENST00000439662 171 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 RPS29P31-201ENST00000446147 164 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 snoU13.29-201ENST00000459370 104 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 RN7SL517P-201ENST00000462240 305 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 SNORA44.1-201ENST00000517031 108 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 AC105129.1-201ENST00000560250 297 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 MIR5685-201ENST00000579080 79 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 MIR5194-201ENST00000582634 120 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 AC113403.1-201ENST00000604910 193 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 MIR6839-201ENST00000620425 113 ntBASIC1.46□□□□□ -2.18
LCE4AQ5TA78 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
LCE4AQ5TA78 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 RNU6-598P-201ENST00000364017 105 ntBASIC1.45□□□□□ -2.18
LCE4AQ5TA78 RNA5SP470-201ENST00000516463 106 ntBASIC1.45□□□□□ -2.18
LCE4AQ5TA78 AC026403.1-201ENST00000518938 295 ntBASIC1.45□□□□□ -2.18
LCE4AQ5TA78 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 AC012531.5-201ENST00000611375 151 ntBASIC1.45□□□□□ -2.18
LCE4AQ5TA78 MIR6507-201ENST00000613630 70 ntBASIC1.45□□□□□ -2.18
LCE4AQ5TA78 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 MAPK10-286ENST00000641208 8747 ntBASIC1.45□□□□□ -2.18
LCE4AQ5TA78 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
LCE4AQ5TA78 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
LCE4AQ5TA78 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
LCE4AQ5TA78 AP002512.4-202ENST00000641599 4530 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC1.44□□□□□ -2.18
LCE4AQ5TA78 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
LCE4AQ5TA78 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
LCE4AQ5TA78 RNU1-59P-201ENST00000364829 162 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 Y_RNA.321-201ENST00000365149 102 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 Y_RNA.407-201ENST00000383986 113 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 SNORA8.2-201ENST00000384372 139 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 SNORD111-201ENST00000408139 94 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 MIR548T-201ENST00000408369 74 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 SNORA57.3-201ENST00000411095 141 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.44□□□□□ -2.18
LCE4AQ5TA78 JTBP1-201ENST00000441314 247 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 UBBP3-201ENST00000445497 241 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 RNA5SP73-201ENST00000516744 108 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 RNU5B-6P-201ENST00000516765 68 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.44□□□□□ -2.18
LCE4AQ5TA78 MIR3664-201ENST00000579074 99 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 RN7SL600P-201ENST00000581811 299 ntBASIC1.44□□□□□ -2.18
LCE4AQ5TA78 MIR4639-201ENST00000584938 69 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms