Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VARS2Q5ST30 Y_RNA.119-201ENST00000363301 96 ntBASIC3.51□□□□□ -1.85
VARS2Q5ST30 MIR660-201ENST00000385235 97 ntBASIC3.51□□□□□ -1.85
VARS2Q5ST30 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.51□□□□□ -1.85
VARS2Q5ST30 MIR3945-201ENST00000581853 98 ntBASIC3.51□□□□□ -1.85
VARS2Q5ST30 U6.81-201ENST00000612550 106 ntBASIC3.51□□□□□ -1.85
VARS2Q5ST30 ZNF209P-201ENST00000593450 2304 ntBASIC3.51□□□□□ -1.85
VARS2Q5ST30 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VARS2Q5ST30 MIR422A-201ENST00000362286 90 ntBASIC3.5□□□□□ -1.85
VARS2Q5ST30 RNU6-369P-201ENST00000362515 102 ntBASIC3.5□□□□□ -1.85
VARS2Q5ST30 RNU1-70P-201ENST00000362618 164 ntBASIC3.5□□□□□ -1.85
VARS2Q5ST30 RNU6-950P-201ENST00000384651 107 ntBASIC3.5□□□□□ -1.85
VARS2Q5ST30 SNORD38B-201ENST00000384690 67 ntBASIC3.5□□□□□ -1.85
VARS2Q5ST30 RNU4-47P-201ENST00000410876 114 ntBASIC3.5□□□□□ -1.85
VARS2Q5ST30 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.5□□□□□ -1.85
VARS2Q5ST30 SNORD38B-202ENST00000625943 69 ntBASIC3.5□□□□□ -1.85
VARS2Q5ST30 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
VARS2Q5ST30 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VARS2Q5ST30 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.49□□□□□ -1.85
VARS2Q5ST30 MIR466-201ENST00000580653 84 ntBASIC3.49□□□□□ -1.85
VARS2Q5ST30 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.49□□□□□ -1.85
VARS2Q5ST30 MIR7515-201ENST00000637837 67 ntBASIC3.49□□□□□ -1.85
VARS2Q5ST30 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VARS2Q5ST30 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VARS2Q5ST30 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
VARS2Q5ST30 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.49□□□□□ -1.85
VARS2Q5ST30 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.49□□□□□ -1.85
VARS2Q5ST30 MIR449A-201ENST00000362113 91 ntBASIC3.48□□□□□ -1.85
VARS2Q5ST30 RNA5SP295-201ENST00000362655 121 ntBASIC3.48□□□□□ -1.85
VARS2Q5ST30 RNU1-101P-201ENST00000391171 127 ntBASIC3.48□□□□□ -1.85
VARS2Q5ST30 AC019129.1-201ENST00000403786 261 ntBASIC3.48□□□□□ -1.85
VARS2Q5ST30 RNU7-106P-201ENST00000459514 67 ntBASIC3.48□□□□□ -1.85
VARS2Q5ST30 SNORA74.3-201ENST00000517108 154 ntBASIC3.48□□□□□ -1.85
VARS2Q5ST30 MIR4425-201ENST00000580572 84 ntBASIC3.48□□□□□ -1.85
VARS2Q5ST30 U4.3-201ENST00000621047 82 ntBASIC3.48□□□□□ -1.85
VARS2Q5ST30 AC008133.2-201ENST00000624540 351 ntBASIC3.48□□□□□ -1.85
VARS2Q5ST30 AC110079.1-202ENST00000635213 138 ntBASIC3.48□□□□□ -1.85
VARS2Q5ST30 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VARS2Q5ST30 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VARS2Q5ST30 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VARS2Q5ST30 SNORA25B-201ENST00000365507 128 ntBASIC3.47□□□□□ -1.85
VARS2Q5ST30 RNU6-1031P-201ENST00000384773 107 ntBASIC3.47□□□□□ -1.85
VARS2Q5ST30 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VARS2Q5ST30 RNU6-1057P-201ENST00000517162 102 ntBASIC3.47□□□□□ -1.85
VARS2Q5ST30 RNU2-19P-201ENST00000517288 84 ntBASIC3.47□□□□□ -1.85
VARS2Q5ST30 NDUFB9P3-201ENST00000521269 501 ntBASIC3.47□□□□□ -1.85
VARS2Q5ST30 MIR548AO-201ENST00000579992 96 ntBASIC3.47□□□□□ -1.85
VARS2Q5ST30 uc_338.1-201ENST00000612113 180 ntBASIC3.47□□□□□ -1.85
VARS2Q5ST30 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
VARS2Q5ST30 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
VARS2Q5ST30 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VARS2Q5ST30 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VARS2Q5ST30 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
VARS2Q5ST30 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
VARS2Q5ST30 RNU6-23P-201ENST00000363283 107 ntBASIC3.46□□□□□ -1.86
VARS2Q5ST30 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.46□□□□□ -1.86
VARS2Q5ST30 RN7SL863P-201ENST00000462370 296 ntBASIC3.46□□□□□ -1.86
VARS2Q5ST30 AC097510.1-201ENST00000510945 133 ntBASIC3.46□□□□□ -1.86
VARS2Q5ST30 UBL5P2-201ENST00000583788 219 ntBASIC3.46□□□□□ -1.86
VARS2Q5ST30 AL033523.1-201ENST00000605153 153 ntBASIC3.46□□□□□ -1.86
VARS2Q5ST30 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.46□□□□□ -1.86
VARS2Q5ST30 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
VARS2Q5ST30 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VARS2Q5ST30 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VARS2Q5ST30 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VARS2Q5ST30 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
VARS2Q5ST30 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VARS2Q5ST30 SNORD113-4-201ENST00000364802 75 ntBASIC3.45□□□□□ -1.86
VARS2Q5ST30 SNORA48.8-201ENST00000391324 134 ntBASIC3.45□□□□□ -1.86
VARS2Q5ST30 RNU7-43P-201ENST00000516554 64 ntBASIC3.45□□□□□ -1.86
VARS2Q5ST30 MIR2682-201ENST00000580305 110 ntBASIC3.45□□□□□ -1.86
VARS2Q5ST30 MIR3140-201ENST00000583685 90 ntBASIC3.45□□□□□ -1.86
VARS2Q5ST30 AL096861.1-201ENST00000610899 123 ntBASIC3.45□□□□□ -1.86
VARS2Q5ST30 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.45□□□□□ -1.86
VARS2Q5ST30 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
VARS2Q5ST30 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.44□□□□□ -1.86
VARS2Q5ST30 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
VARS2Q5ST30 SNORA44-201ENST00000384584 132 ntBASIC3.44□□□□□ -1.86
VARS2Q5ST30 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.44□□□□□ -1.86
VARS2Q5ST30 RNA5SP229-201ENST00000410809 99 ntBASIC3.44□□□□□ -1.86
VARS2Q5ST30 MIR5089-201ENST00000580047 84 ntBASIC3.44□□□□□ -1.86
VARS2Q5ST30 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VARS2Q5ST30 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
VARS2Q5ST30 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VARS2Q5ST30 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VARS2Q5ST30 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VARS2Q5ST30 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
VARS2Q5ST30 RNU6-940P-201ENST00000363433 104 ntBASIC3.43□□□□□ -1.86
VARS2Q5ST30 RNU6-824P-201ENST00000363724 104 ntBASIC3.43□□□□□ -1.86
VARS2Q5ST30 SNORA25.5-201ENST00000363782 126 ntBASIC3.43□□□□□ -1.86
VARS2Q5ST30 Y_RNA.239-201ENST00000364444 113 ntBASIC3.43□□□□□ -1.86
VARS2Q5ST30 RPS27P16-201ENST00000425758 201 ntBASIC3.43□□□□□ -1.86
VARS2Q5ST30 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.43□□□□□ -1.86
VARS2Q5ST30 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VARS2Q5ST30 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VARS2Q5ST30 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.42□□□□□ -1.86
VARS2Q5ST30 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VARS2Q5ST30 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VARS2Q5ST30 SNORA24B-201ENST00000384176 131 ntBASIC3.42□□□□□ -1.86
VARS2Q5ST30 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms