Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MIR3074-201ENST00000384885 81 ntBASIC3.15□□□□□ -1.91
GFRA3O60609 MIR95-201ENST00000385072 81 ntBASIC3.15□□□□□ -1.91
GFRA3O60609 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
GFRA3O60609 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.15□□□□□ -1.91
GFRA3O60609 RNU7-12P-201ENST00000516030 62 ntBASIC3.15□□□□□ -1.91
GFRA3O60609 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
GFRA3O60609 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
GFRA3O60609 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
GFRA3O60609 GABRG2-229ENST00000641017 3628 ntBASIC3.14□□□□□ -1.91
GFRA3O60609 AL596028.1-201ENST00000326971 197 ntBASIC3.14□□□□□ -1.91
GFRA3O60609 RNY4P3-201ENST00000365254 95 ntBASIC3.14□□□□□ -1.91
GFRA3O60609 AC027119.1-201ENST00000440877 241 ntBASIC3.14□□□□□ -1.91
GFRA3O60609 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.14□□□□□ -1.91
GFRA3O60609 AC244205.2-202ENST00000635781 342 ntBASIC3.14□□□□□ -1.91
GFRA3O60609 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.14□□□□□ -1.91
GFRA3O60609 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
GFRA3O60609 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GFRA3O60609 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
GFRA3O60609 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GFRA3O60609 Y_RNA.119-201ENST00000363301 96 ntBASIC3.13□□□□□ -1.91
GFRA3O60609 Y_RNA.164-201ENST00000363709 102 ntBASIC3.13□□□□□ -1.91
GFRA3O60609 SNORA24B-201ENST00000384176 131 ntBASIC3.13□□□□□ -1.91
GFRA3O60609 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
GFRA3O60609 RNA5SP252-201ENST00000391131 119 ntBASIC3.13□□□□□ -1.91
GFRA3O60609 AL513328.1-201ENST00000446460 224 ntBASIC3.13□□□□□ -1.91
GFRA3O60609 AC079600.2-201ENST00000550076 130 ntBASIC3.13□□□□□ -1.91
GFRA3O60609 AC121758.2-201ENST00000553271 193 ntBASIC3.13□□□□□ -1.91
GFRA3O60609 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.13□□□□□ -1.91
GFRA3O60609 AC002076.2-201ENST00000617362 122 ntBASIC3.13□□□□□ -1.91
GFRA3O60609 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
GFRA3O60609 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.13□□□□□ -1.91
GFRA3O60609 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.12□□□□□ -1.91
GFRA3O60609 RNU6-1335P-201ENST00000365426 107 ntBASIC3.12□□□□□ -1.91
GFRA3O60609 MIR184-201ENST00000384962 84 ntBASIC3.12□□□□□ -1.91
GFRA3O60609 RNU6-667P-201ENST00000517186 102 ntBASIC3.12□□□□□ -1.91
GFRA3O60609 MIR5047-201ENST00000579212 100 ntBASIC3.12□□□□□ -1.91
GFRA3O60609 SNORD53-201ENST00000579969 78 ntBASIC3.12□□□□□ -1.91
GFRA3O60609 AL662814.1-201ENST00000617364 121 ntBASIC3.12□□□□□ -1.91
GFRA3O60609 U6.109-201ENST00000636749 87 ntBASIC3.12□□□□□ -1.91
GFRA3O60609 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GFRA3O60609 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
GFRA3O60609 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.12□□□□□ -1.91
GFRA3O60609 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
GFRA3O60609 RNU6-1312P-201ENST00000362425 108 ntBASIC3.11□□□□□ -1.91
GFRA3O60609 MIR592-201ENST00000384959 97 ntBASIC3.11□□□□□ -1.91
GFRA3O60609 HMGN2P39-201ENST00000398005 273 ntBASIC3.11□□□□□ -1.91
GFRA3O60609 AL591806.2-201ENST00000433122 173 ntBASIC3.11□□□□□ -1.91
GFRA3O60609 SCARNA21.1-201ENST00000515996 128 ntBASIC3.11□□□□□ -1.91
GFRA3O60609 AC026333.2-201ENST00000542164 106 ntBASIC3.11□□□□□ -1.91
GFRA3O60609 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.11□□□□□ -1.91
GFRA3O60609 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.11□□□□□ -1.91
GFRA3O60609 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
GFRA3O60609 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.11□□□□□ -1.91
GFRA3O60609 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
GFRA3O60609 Y_RNA.226-201ENST00000364337 114 ntBASIC3.1□□□□□ -1.91
GFRA3O60609 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GFRA3O60609 MIR526A1-201ENST00000384897 85 ntBASIC3.1□□□□□ -1.91
GFRA3O60609 MIR764-201ENST00000390811 85 ntBASIC3.1□□□□□ -1.91
GFRA3O60609 AC019129.1-201ENST00000403786 261 ntBASIC3.1□□□□□ -1.91
GFRA3O60609 RNU6-1328P-201ENST00000410938 106 ntBASIC3.1□□□□□ -1.91
GFRA3O60609 HMGN2P16-201ENST00000456802 261 ntBASIC3.1□□□□□ -1.91
GFRA3O60609 CYP3A52P-201ENST00000563326 91 ntBASIC3.1□□□□□ -1.91
GFRA3O60609 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.1□□□□□ -1.91
GFRA3O60609 MIR622-201ENST00000638396 96 ntBASIC3.1□□□□□ -1.91
GFRA3O60609 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
GFRA3O60609 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GFRA3O60609 AL353746.1-201ENST00000566293 6881 ntBASIC3.09□□□□□ -1.91
GFRA3O60609 Y_RNA.118-201ENST00000363300 101 ntBASIC3.09□□□□□ -1.91
GFRA3O60609 RNA5SP237-201ENST00000410414 113 ntBASIC3.09□□□□□ -1.91
GFRA3O60609 RNA5SP38-201ENST00000410750 119 ntBASIC3.09□□□□□ -1.91
GFRA3O60609 HSPE1P9-201ENST00000440046 311 ntBASIC3.09□□□□□ -1.91
GFRA3O60609 RNA5SP458-201ENST00000516188 119 ntBASIC3.09□□□□□ -1.91
GFRA3O60609 MIR3920-201ENST00000581751 86 ntBASIC3.09□□□□□ -1.91
GFRA3O60609 MIR5739-201ENST00000619803 80 ntBASIC3.09□□□□□ -1.91
GFRA3O60609 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.09□□□□□ -1.91
GFRA3O60609 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.09□□□□□ -1.91
GFRA3O60609 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
GFRA3O60609 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
GFRA3O60609 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.09□□□□□ -1.92
GFRA3O60609 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
GFRA3O60609 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
GFRA3O60609 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
GFRA3O60609 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
GFRA3O60609 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.08□□□□□ -1.92
GFRA3O60609 RNA5SP99-201ENST00000364020 114 ntBASIC3.08□□□□□ -1.92
GFRA3O60609 Y_RNA.239-201ENST00000364444 113 ntBASIC3.08□□□□□ -1.92
GFRA3O60609 SNORA16B-201ENST00000364674 135 ntBASIC3.08□□□□□ -1.92
GFRA3O60609 MIR767-201ENST00000390228 109 ntBASIC3.08□□□□□ -1.92
GFRA3O60609 RNU6-122P-201ENST00000516818 107 ntBASIC3.08□□□□□ -1.92
GFRA3O60609 SNORA48.11-201ENST00000517015 89 ntBASIC3.08□□□□□ -1.92
GFRA3O60609 IST1-227ENST00000626438 126 ntTSL 5 BASIC3.08□□□□□ -1.92
GFRA3O60609 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
GFRA3O60609 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
GFRA3O60609 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
GFRA3O60609 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.07□□□□□ -1.92
GFRA3O60609 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
GFRA3O60609 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
GFRA3O60609 MIR423-201ENST00000362201 94 ntBASIC3.07□□□□□ -1.92
GFRA3O60609 RNU6-668P-201ENST00000364180 107 ntBASIC3.07□□□□□ -1.92
GFRA3O60609 SNORD15B-201ENST00000384714 146 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms