Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RNU11-3P-201ENST00000391111 133 ntBASIC3.19□□□□□ -1.9
ACTN4O43707 RNU6-380P-201ENST00000410207 107 ntBASIC3.19□□□□□ -1.9
ACTN4O43707 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.19□□□□□ -1.9
ACTN4O43707 SNORD4B-201ENST00000459083 72 ntBASIC3.19□□□□□ -1.9
ACTN4O43707 snoU13.11-201ENST00000459219 104 ntBASIC3.19□□□□□ -1.9
ACTN4O43707 RNU6-523P-201ENST00000516304 54 ntBASIC3.19□□□□□ -1.9
ACTN4O43707 SNORA74.3-201ENST00000517108 154 ntBASIC3.19□□□□□ -1.9
ACTN4O43707 AC021506.2-201ENST00000612354 169 ntBASIC3.19□□□□□ -1.9
ACTN4O43707 MIR8057-201ENST00000620957 69 ntBASIC3.19□□□□□ -1.9
ACTN4O43707 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.19□□□□□ -1.9
ACTN4O43707 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.19□□□□□ -1.9
ACTN4O43707 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ACTN4O43707 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
ACTN4O43707 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.18□□□□□ -1.9
ACTN4O43707 RNA5SP133-201ENST00000363368 119 ntBASIC3.18□□□□□ -1.9
ACTN4O43707 MIR491-201ENST00000384877 84 ntBASIC3.18□□□□□ -1.9
ACTN4O43707 MIR1289-1-201ENST00000408836 144 ntBASIC3.18□□□□□ -1.9
ACTN4O43707 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
ACTN4O43707 RPS29P11-201ENST00000496507 171 ntBASIC3.18□□□□□ -1.9
ACTN4O43707 AC133485.1-201ENST00000567176 124 ntBASIC3.18□□□□□ -1.9
ACTN4O43707 MIR8066-201ENST00000617280 78 ntBASIC3.18□□□□□ -1.9
ACTN4O43707 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ACTN4O43707 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ACTN4O43707 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.17□□□□□ -1.9
ACTN4O43707 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.17□□□□□ -1.9
ACTN4O43707 MIR422A-201ENST00000362286 90 ntBASIC3.17□□□□□ -1.9
ACTN4O43707 MIR520A-201ENST00000384862 85 ntBASIC3.17□□□□□ -1.9
ACTN4O43707 MIR4709-201ENST00000577272 72 ntBASIC3.17□□□□□ -1.9
ACTN4O43707 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.17□□□□□ -1.9
ACTN4O43707 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.17□□□□□ -1.9
ACTN4O43707 HSBP1P2-201ENST00000299671 229 ntBASIC3.16□□□□□ -1.9
ACTN4O43707 RNY1P13-201ENST00000365030 105 ntBASIC3.16□□□□□ -1.9
ACTN4O43707 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ACTN4O43707 AC107016.2-201ENST00000547968 190 ntBASIC3.16□□□□□ -1.9
ACTN4O43707 MIR3126-201ENST00000577443 74 ntBASIC3.16□□□□□ -1.9
ACTN4O43707 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.16□□□□□ -1.9
ACTN4O43707 AC008133.2-201ENST00000624540 351 ntBASIC3.16□□□□□ -1.9
ACTN4O43707 RNU1-91P-201ENST00000364746 163 ntBASIC3.15□□□□□ -1.91
ACTN4O43707 SNORD88.1-201ENST00000408684 91 ntBASIC3.15□□□□□ -1.91
ACTN4O43707 RNA5SP237-201ENST00000410414 113 ntBASIC3.15□□□□□ -1.91
ACTN4O43707 AL139132.1-201ENST00000431587 344 ntBASIC3.15□□□□□ -1.91
ACTN4O43707 RNU6-539P-201ENST00000516665 103 ntBASIC3.15□□□□□ -1.91
ACTN4O43707 AP000753.3-201ENST00000604083 169 ntBASIC3.15□□□□□ -1.91
ACTN4O43707 AL161756.2-201ENST00000604597 246 ntBASIC3.15□□□□□ -1.91
ACTN4O43707 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.15□□□□□ -1.91
ACTN4O43707 MIR6733-201ENST00000635723 61 ntBASIC3.15□□□□□ -1.91
ACTN4O43707 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
ACTN4O43707 RNU6-686P-201ENST00000364839 107 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 RNU6-851P-201ENST00000384565 107 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 AL023284.1-201ENST00000403956 276 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 AC027119.1-201ENST00000440877 241 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 RNA5SP341-201ENST00000516261 117 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 RNU7-43P-201ENST00000516554 64 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 SCARNA13-201ENST00000516672 275 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 RNU6-557P-201ENST00000516842 110 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 MIR3605-201ENST00000583214 100 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 AL512598.1-201ENST00000610158 273 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 AP006437.1-201ENST00000641440 3685 ntBASIC3.14□□□□□ -1.91
ACTN4O43707 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
ACTN4O43707 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ACTN4O43707 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
ACTN4O43707 Y_RNA.508-201ENST00000384502 114 ntBASIC3.13□□□□□ -1.91
ACTN4O43707 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.13□□□□□ -1.91
ACTN4O43707 SCARNA18B-201ENST00000458806 135 ntBASIC3.13□□□□□ -1.91
ACTN4O43707 RNU6-917P-201ENST00000516294 104 ntBASIC3.13□□□□□ -1.91
ACTN4O43707 SNORA9.3-201ENST00000516383 129 ntBASIC3.13□□□□□ -1.91
ACTN4O43707 SNORA74D-201ENST00000516404 141 ntBASIC3.13□□□□□ -1.91
ACTN4O43707 RNA5SP437-201ENST00000517249 129 ntBASIC3.13□□□□□ -1.91
ACTN4O43707 MIR3134-201ENST00000579433 74 ntBASIC3.13□□□□□ -1.91
ACTN4O43707 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ACTN4O43707 MIRLET7A1-201ENST00000362295 80 ntBASIC3.12□□□□□ -1.91
ACTN4O43707 SNORA9-201ENST00000384215 133 ntBASIC3.12□□□□□ -1.91
ACTN4O43707 RNU6-411P-201ENST00000384451 107 ntBASIC3.12□□□□□ -1.91
ACTN4O43707 SNORD38B-201ENST00000384690 67 ntBASIC3.12□□□□□ -1.91
ACTN4O43707 SNORA40.18-201ENST00000391200 128 ntBASIC3.12□□□□□ -1.91
ACTN4O43707 RNU6-871P-201ENST00000516122 100 ntBASIC3.12□□□□□ -1.91
ACTN4O43707 MIR4764-201ENST00000580680 88 ntBASIC3.12□□□□□ -1.91
ACTN4O43707 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTN4O43707 SNORD38B-202ENST00000625943 69 ntBASIC3.12□□□□□ -1.91
ACTN4O43707 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ACTN4O43707 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
ACTN4O43707 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ACTN4O43707 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ACTN4O43707 snoU13.27-201ENST00000459278 104 ntBASIC3.11□□□□□ -1.91
ACTN4O43707 AC125388.1-201ENST00000459631 156 ntBASIC3.11□□□□□ -1.91
ACTN4O43707 AC141846.1-201ENST00000568348 142 ntBASIC3.11□□□□□ -1.91
ACTN4O43707 MIR4796-201ENST00000580742 81 ntBASIC3.11□□□□□ -1.91
ACTN4O43707 AC090897.1-201ENST00000580909 226 ntBASIC3.11□□□□□ -1.91
ACTN4O43707 SCARNA15.3-201ENST00000626315 122 ntBASIC3.11□□□□□ -1.91
ACTN4O43707 SCARNA4.1-201ENST00000628597 123 ntBASIC3.11□□□□□ -1.91
ACTN4O43707 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.1□□□□□ -1.91
ACTN4O43707 MIR26A1-201ENST00000362205 77 ntBASIC3.1□□□□□ -1.91
ACTN4O43707 SNORA63.2-201ENST00000362603 126 ntBASIC3.1□□□□□ -1.91
ACTN4O43707 RNY1P2-201ENST00000364820 117 ntBASIC3.1□□□□□ -1.91
ACTN4O43707 AC022018.1-201ENST00000430685 241 ntBASIC3.1□□□□□ -1.91
ACTN4O43707 RNU7-85P-201ENST00000458851 63 ntBASIC3.1□□□□□ -1.91
ACTN4O43707 RNVU1-2-201ENST00000516326 135 ntBASIC3.1□□□□□ -1.91
ACTN4O43707 MIR548AO-201ENST00000579992 96 ntBASIC3.1□□□□□ -1.91
ACTN4O43707 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms