Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNU6-915P-201ENST00000364943 103 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 SNORD50.2-201ENST00000365465 70 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 SNORA51.10-201ENST00000384418 136 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 Y_RNA.537-201ENST00000384626 109 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 SNORD41-201ENST00000386967 70 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 SNORA40-201ENST00000388090 126 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 AC027119.1-201ENST00000440877 241 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 RPS29P29-201ENST00000456396 171 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 RNU7-96P-201ENST00000459535 64 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 SNORD111.1-201ENST00000516421 86 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 Y_RNA.690-201ENST00000516603 95 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 MIR4791-201ENST00000607666 84 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 AC243994.1-201ENST00000618627 109 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 AL161722.3-201ENST00000605789 2983 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 AL596211.1-201ENST00000569873 2277 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC113Q9H0I3 AL035398.1-201ENST00000430869 322 ntBASIC1.99□□□□□ -2.09
CCDC113Q9H0I3 RPL30P7-201ENST00000479312 323 ntBASIC1.99□□□□□ -2.09
CCDC113Q9H0I3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.99□□□□□ -2.09
CCDC113Q9H0I3 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
CCDC113Q9H0I3 AP001340.1-201ENST00000624405 217 ntBASIC1.99□□□□□ -2.09
CCDC113Q9H0I3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC113Q9H0I3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC113Q9H0I3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.98□□□□□ -2.09
CCDC113Q9H0I3 RNU7-53P-201ENST00000516705 60 ntBASIC1.98□□□□□ -2.09
CCDC113Q9H0I3 SCARNA15-202ENST00000516881 127 ntBASIC1.98□□□□□ -2.09
CCDC113Q9H0I3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.98□□□□□ -2.09
CCDC113Q9H0I3 MIR3124-201ENST00000582636 67 ntBASIC1.98□□□□□ -2.09
CCDC113Q9H0I3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.98□□□□□ -2.09
CCDC113Q9H0I3 AC011603.4-201ENST00000611325 277 ntBASIC1.98□□□□□ -2.09
CCDC113Q9H0I3 TUG1_4.1-201ENST00000619464 181 ntBASIC1.98□□□□□ -2.09
CCDC113Q9H0I3 AC008133.2-201ENST00000624540 351 ntBASIC1.98□□□□□ -2.09
CCDC113Q9H0I3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 SNORA16.1-201ENST00000364597 132 ntBASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 AL603914.1-201ENST00000401964 204 ntBASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 RNU4-61P-201ENST00000411243 107 ntBASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 TMSB4XP3-201ENST00000445144 114 ntBASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 RNU2-11P-201ENST00000459191 187 ntBASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 Y_RNA.686-201ENST00000516548 134 ntBASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 AC015712.3-201ENST00000559380 164 ntBASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC113Q9H0I3 AC245517.4-201ENST00000448601 281 ntBASIC1.96□□□□□ -2.1
CCDC113Q9H0I3 RNA5SP445-201ENST00000515889 115 ntBASIC1.96□□□□□ -2.1
CCDC113Q9H0I3 RNU6-998P-201ENST00000515894 101 ntBASIC1.96□□□□□ -2.1
CCDC113Q9H0I3 RNU6-250P-201ENST00000516958 103 ntBASIC1.96□□□□□ -2.1
CCDC113Q9H0I3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC113Q9H0I3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CCDC113Q9H0I3 AL121890.5-201ENST00000620848 304 ntBASIC1.96□□□□□ -2.1
CCDC113Q9H0I3 AC091932.4-201ENST00000623386 200 ntBASIC1.96□□□□□ -2.1
CCDC113Q9H0I3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC113Q9H0I3 RNU6-257P-201ENST00000410238 98 ntBASIC1.95□□□□□ -2.1
CCDC113Q9H0I3 RNU2-13P-201ENST00000515909 113 ntBASIC1.95□□□□□ -2.1
CCDC113Q9H0I3 MIR4255-201ENST00000579351 72 ntBASIC1.95□□□□□ -2.1
CCDC113Q9H0I3 MIR4524B-201ENST00000581569 115 ntBASIC1.95□□□□□ -2.1
CCDC113Q9H0I3 U7.2-201ENST00000607576 63 ntBASIC1.95□□□□□ -2.1
CCDC113Q9H0I3 MIR4251-201ENST00000635819 61 ntBASIC1.95□□□□□ -2.1
CCDC113Q9H0I3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC113Q9H0I3 MTND4LP9-201ENST00000427694 174 ntBASIC1.94□□□□□ -2.1
CCDC113Q9H0I3 AC108210.2-201ENST00000503681 201 ntBASIC1.94□□□□□ -2.1
CCDC113Q9H0I3 RNU7-41P-201ENST00000515917 61 ntBASIC1.94□□□□□ -2.1
CCDC113Q9H0I3 MIR3664-201ENST00000579074 99 ntBASIC1.94□□□□□ -2.1
CCDC113Q9H0I3 MIR3683-201ENST00000580847 82 ntBASIC1.94□□□□□ -2.1
CCDC113Q9H0I3 AL022345.2-201ENST00000606307 135 ntBASIC1.94□□□□□ -2.1
CCDC113Q9H0I3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.94□□□□□ -2.1
CCDC113Q9H0I3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC113Q9H0I3 RNU6-309P-201ENST00000364573 106 ntBASIC1.93□□□□□ -2.1
CCDC113Q9H0I3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.93□□□□□ -2.1
CCDC113Q9H0I3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC113Q9H0I3 RNU6-1211P-201ENST00000459179 105 ntBASIC1.93□□□□□ -2.1
CCDC113Q9H0I3 snoU13.16-201ENST00000459350 104 ntBASIC1.93□□□□□ -2.1
CCDC113Q9H0I3 RNU6-548P-201ENST00000517083 115 ntBASIC1.93□□□□□ -2.1
CCDC113Q9H0I3 AL512310.8-201ENST00000550183 120 ntBASIC1.93□□□□□ -2.1
CCDC113Q9H0I3 RNA5SP48-201ENST00000363969 126 ntBASIC1.92□□□□□ -2.1
CCDC113Q9H0I3 MIR539-201ENST00000365690 78 ntBASIC1.92□□□□□ -2.1
CCDC113Q9H0I3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CCDC113Q9H0I3 RNA5SP236-201ENST00000516169 116 ntBASIC1.92□□□□□ -2.1
CCDC113Q9H0I3 RNU6-789P-201ENST00000517105 102 ntBASIC1.92□□□□□ -2.1
CCDC113Q9H0I3 RNU6-902P-201ENST00000517212 91 ntBASIC1.92□□□□□ -2.1
CCDC113Q9H0I3 RNU2-60P-201ENST00000517290 128 ntBASIC1.92□□□□□ -2.1
CCDC113Q9H0I3 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
CCDC113Q9H0I3 AL096861.1-201ENST00000610899 123 ntBASIC1.92□□□□□ -2.1
CCDC113Q9H0I3 MIR8081-201ENST00000611533 95 ntBASIC1.92□□□□□ -2.1
CCDC113Q9H0I3 SNORA24-201ENST00000384096 131 ntBASIC1.91□□□□□ -2.1
CCDC113Q9H0I3 Y_RNA.586-201ENST00000391146 98 ntBASIC1.91□□□□□ -2.1
CCDC113Q9H0I3 RN7SKP88-201ENST00000516847 250 ntBASIC1.91□□□□□ -2.1
CCDC113Q9H0I3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC113Q9H0I3 AC024614.2-201ENST00000577584 372 ntBASIC1.91□□□□□ -2.1
CCDC113Q9H0I3 MIR3152-201ENST00000579801 74 ntBASIC1.91□□□□□ -2.1
CCDC113Q9H0I3 7SK.8-201ENST00000612110 250 ntBASIC1.91□□□□□ -2.1
CCDC113Q9H0I3 7SK.11-201ENST00000615477 250 ntBASIC1.91□□□□□ -2.1
CCDC113Q9H0I3 7SK.13-201ENST00000622040 250 ntBASIC1.91□□□□□ -2.1
CCDC113Q9H0I3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC113Q9H0I3 RNA5SP432-201ENST00000362480 116 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 RNY1P6-201ENST00000384193 109 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 RNA5SP261-201ENST00000410536 106 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 RPS27P16-201ENST00000425758 201 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 RNU7-73P-201ENST00000458743 63 ntBASIC1.9□□□□□ -2.11
CCDC113Q9H0I3 RNU6-113P-201ENST00000516653 101 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms