Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 AC018868.1-201ENST00000491307 315 ntBASIC3.63□□□□□ -1.83
NBPF3Q9H094 RNA5SP217-201ENST00000515959 91 ntBASIC3.63□□□□□ -1.83
NBPF3Q9H094 RNU6-1108P-201ENST00000516308 104 ntBASIC3.63□□□□□ -1.83
NBPF3Q9H094 AC007318.2-201ENST00000620999 243 ntBASIC3.63□□□□□ -1.83
NBPF3Q9H094 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.62□□□□□ -1.83
NBPF3Q9H094 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
NBPF3Q9H094 Y_RNA.99-201ENST00000363138 105 ntBASIC3.62□□□□□ -1.83
NBPF3Q9H094 RNU6-1072P-201ENST00000384703 107 ntBASIC3.62□□□□□ -1.83
NBPF3Q9H094 SNORD15B-201ENST00000384714 146 ntBASIC3.62□□□□□ -1.83
NBPF3Q9H094 RNU6-443P-201ENST00000384780 107 ntBASIC3.62□□□□□ -1.83
NBPF3Q9H094 U8.16-201ENST00000391279 133 ntBASIC3.62□□□□□ -1.83
NBPF3Q9H094 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.62□□□□□ -1.83
NBPF3Q9H094 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.62□□□□□ -1.83
NBPF3Q9H094 RNU7-48P-201ENST00000458875 63 ntBASIC3.62□□□□□ -1.83
NBPF3Q9H094 RNU7-137P-201ENST00000516788 62 ntBASIC3.62□□□□□ -1.83
NBPF3Q9H094 SNORA28-201ENST00000606769 126 ntBASIC3.62□□□□□ -1.83
NBPF3Q9H094 AC243994.1-201ENST00000618627 109 ntBASIC3.62□□□□□ -1.83
NBPF3Q9H094 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.62□□□□□ -1.83
NBPF3Q9H094 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NBPF3Q9H094 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NBPF3Q9H094 RNU6-160P-201ENST00000384591 107 ntBASIC3.61□□□□□ -1.83
NBPF3Q9H094 SNORD28B-201ENST00000390993 75 ntBASIC3.61□□□□□ -1.83
NBPF3Q9H094 MIR1261-201ENST00000408659 82 ntBASIC3.61□□□□□ -1.83
NBPF3Q9H094 RNU6-634P-201ENST00000459134 106 ntBASIC3.61□□□□□ -1.83
NBPF3Q9H094 RNU6-70P-201ENST00000516438 60 ntBASIC3.61□□□□□ -1.83
NBPF3Q9H094 SNORA31.10-201ENST00000516482 106 ntBASIC3.61□□□□□ -1.83
NBPF3Q9H094 AL355297.2-201ENST00000604792 129 ntBASIC3.61□□□□□ -1.83
NBPF3Q9H094 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.61□□□□□ -1.83
NBPF3Q9H094 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.61□□□□□ -1.83
NBPF3Q9H094 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NBPF3Q9H094 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NBPF3Q9H094 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NBPF3Q9H094 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NBPF3Q9H094 RNU6-649P-201ENST00000384463 107 ntBASIC3.6□□□□□ -1.83
NBPF3Q9H094 RNA5SP344-201ENST00000411081 104 ntBASIC3.6□□□□□ -1.83
NBPF3Q9H094 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NBPF3Q9H094 RNU7-79P-201ENST00000516082 62 ntBASIC3.6□□□□□ -1.83
NBPF3Q9H094 RNU6-687P-201ENST00000516443 89 ntBASIC3.6□□□□□ -1.83
NBPF3Q9H094 MIR4435-1-201ENST00000582552 80 ntBASIC3.6□□□□□ -1.83
NBPF3Q9H094 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NBPF3Q9H094 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NBPF3Q9H094 RNU6-833P-201ENST00000363486 107 ntBASIC3.59□□□□□ -1.83
NBPF3Q9H094 SNORA71.1-201ENST00000364523 117 ntBASIC3.59□□□□□ -1.83
NBPF3Q9H094 Y_RNA.508-201ENST00000384502 114 ntBASIC3.59□□□□□ -1.83
NBPF3Q9H094 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.59□□□□□ -1.83
NBPF3Q9H094 RNU6-56P-201ENST00000516986 93 ntBASIC3.59□□□□□ -1.83
NBPF3Q9H094 MIR4796-201ENST00000580742 81 ntBASIC3.59□□□□□ -1.83
NBPF3Q9H094 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NBPF3Q9H094 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
NBPF3Q9H094 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NBPF3Q9H094 MIR22-201ENST00000362190 85 ntBASIC3.58□□□□□ -1.84
NBPF3Q9H094 RNA5SP383-201ENST00000362934 120 ntBASIC3.58□□□□□ -1.84
NBPF3Q9H094 RNU2-59P-201ENST00000410482 191 ntBASIC3.58□□□□□ -1.84
NBPF3Q9H094 RNU6-602P-201ENST00000411155 105 ntBASIC3.58□□□□□ -1.84
NBPF3Q9H094 EEF1A1P41-201ENST00000414667 207 ntBASIC3.58□□□□□ -1.84
NBPF3Q9H094 AC022018.1-201ENST00000430685 241 ntBASIC3.58□□□□□ -1.84
NBPF3Q9H094 HSPE1P9-201ENST00000440046 311 ntBASIC3.58□□□□□ -1.84
NBPF3Q9H094 RNU7-85P-201ENST00000458851 63 ntBASIC3.58□□□□□ -1.84
NBPF3Q9H094 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.58□□□□□ -1.84
NBPF3Q9H094 MIR664A-201ENST00000626086 82 ntBASIC3.58□□□□□ -1.84
NBPF3Q9H094 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
NBPF3Q9H094 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NBPF3Q9H094 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NBPF3Q9H094 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NBPF3Q9H094 RNU4-82P-201ENST00000362443 140 ntBASIC3.57□□□□□ -1.84
NBPF3Q9H094 Y_RNA.98-201ENST00000363109 102 ntBASIC3.57□□□□□ -1.84
NBPF3Q9H094 SNORD114-10-201ENST00000363409 72 ntBASIC3.57□□□□□ -1.84
NBPF3Q9H094 MIR635-201ENST00000384830 98 ntBASIC3.57□□□□□ -1.84
NBPF3Q9H094 MIR1262-201ENST00000408276 93 ntBASIC3.57□□□□□ -1.84
NBPF3Q9H094 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.57□□□□□ -1.84
NBPF3Q9H094 MIR548AR-201ENST00000582191 57 ntBASIC3.57□□□□□ -1.84
NBPF3Q9H094 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.57□□□□□ -1.84
NBPF3Q9H094 MIR8065-201ENST00000620577 100 ntBASIC3.57□□□□□ -1.84
NBPF3Q9H094 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NBPF3Q9H094 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NBPF3Q9H094 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NBPF3Q9H094 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.56□□□□□ -1.84
NBPF3Q9H094 SNORA46-201ENST00000384762 135 ntBASIC3.56□□□□□ -1.84
NBPF3Q9H094 MIR561-201ENST00000385216 97 ntBASIC3.56□□□□□ -1.84
NBPF3Q9H094 Y_RNA.681-201ENST00000516445 113 ntBASIC3.56□□□□□ -1.84
NBPF3Q9H094 RNA5SP168-201ENST00000516642 112 ntBASIC3.56□□□□□ -1.84
NBPF3Q9H094 AP001362.1-201ENST00000625165 124 ntBASIC3.56□□□□□ -1.84
NBPF3Q9H094 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NBPF3Q9H094 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.55□□□□□ -1.84
NBPF3Q9H094 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NBPF3Q9H094 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NBPF3Q9H094 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
NBPF3Q9H094 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNA5SP493-201ENST00000364115 91 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 SNORD30.1-201ENST00000391309 70 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNU6-447P-201ENST00000410293 104 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNU6-1118P-201ENST00000410382 104 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNU6-1076P-201ENST00000410397 104 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNU6-355P-201ENST00000410427 104 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNU6-791P-201ENST00000410467 104 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNU6-705P-201ENST00000410601 104 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNU6-1100P-201ENST00000410691 104 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNU6-860P-201ENST00000410860 104 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNU6-1217P-201ENST00000411276 104 ntBASIC3.55□□□□□ -1.84
NBPF3Q9H094 RNU6-785P-201ENST00000411324 104 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 271.2 ms