Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 AL449363.1-201ENST00000617815 186 ntBASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 AC104332.2-201ENST00000429959 156 ntBASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 RNVU1-2-201ENST00000516326 135 ntBASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 AL606490.9-201ENST00000603331 271 ntBASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
MS4A3Q96HJ5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 SNORA25.3-201ENST00000363205 127 ntBASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 AC097635.1-201ENST00000450678 155 ntBASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 AC073869.9-201ENST00000641610 120 ntBASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
MS4A3Q96HJ5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 Y_RNA.56-201ENST00000362798 112 ntBASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 RNU6-112P-201ENST00000363599 104 ntBASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 RNU1-33P-201ENST00000364249 162 ntBASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 MT-TN-201ENST00000387400 73 ntBASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 RNU6-628P-201ENST00000410675 107 ntBASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 SNORD111.1-201ENST00000516421 86 ntBASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 MIR3160-1-201ENST00000577972 85 ntBASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 AP000942.3-201ENST00000603702 160 ntBASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 MIR6875-201ENST00000617506 72 ntBASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 MIR6500-201ENST00000622700 86 ntBASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
MS4A3Q96HJ5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 RNA5SP399-201ENST00000364003 117 ntBASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 MIR1193-201ENST00000408109 78 ntBASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 GTF3AP2-201ENST00000557014 266 ntBASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 AC103810.8-201ENST00000607347 118 ntBASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 AC012531.5-201ENST00000611375 151 ntBASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
MS4A3Q96HJ5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 RNU6-1123P-201ENST00000362347 106 ntBASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 MIR653-201ENST00000385279 96 ntBASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 SNORA48.1-201ENST00000390879 135 ntBASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 RNA5SP299-201ENST00000391203 116 ntBASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 SNORD93-201ENST00000408813 74 ntBASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 RNU6-1054P-201ENST00000411293 104 ntBASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 RPL30P7-201ENST00000479312 323 ntBASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 RNA5SP179-201ENST00000517284 121 ntBASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 AC091167.4-201ENST00000605079 184 ntBASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 AC022202.1-201ENST00000613515 211 ntBASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.46□□□□□ -1.86
MS4A3Q96HJ5 RNU1-138P-201ENST00000384093 164 ntBASIC3.45□□□□□ -1.86
MS4A3Q96HJ5 MIR1251-201ENST00000408552 70 ntBASIC3.45□□□□□ -1.86
MS4A3Q96HJ5 MIR1302-7-201ENST00000408841 72 ntBASIC3.45□□□□□ -1.86
MS4A3Q96HJ5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.45□□□□□ -1.86
MS4A3Q96HJ5 AC244205.2-202ENST00000635781 342 ntBASIC3.45□□□□□ -1.86
MS4A3Q96HJ5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.45□□□□□ -1.86
MS4A3Q96HJ5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
MS4A3Q96HJ5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MS4A3Q96HJ5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MS4A3Q96HJ5 SNORD6-201ENST00000365444 73 ntBASIC3.44□□□□□ -1.86
MS4A3Q96HJ5 SNORD75.2-201ENST00000408784 58 ntBASIC3.44□□□□□ -1.86
MS4A3Q96HJ5 SNORA31.15-201ENST00000516771 132 ntBASIC3.44□□□□□ -1.86
MS4A3Q96HJ5 MIR3186-201ENST00000577404 85 ntBASIC3.44□□□□□ -1.86
MS4A3Q96HJ5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.44□□□□□ -1.86
MS4A3Q96HJ5 AL591424.2-201ENST00000617023 128 ntBASIC3.44□□□□□ -1.86
MS4A3Q96HJ5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MS4A3Q96HJ5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 RNU6-403P-201ENST00000363163 104 ntBASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 RNA5SP465-201ENST00000391195 109 ntBASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 AC026402.1-201ENST00000513642 170 ntBASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 RNU6-1265P-201ENST00000516342 103 ntBASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 AC013244.2-201ENST00000603396 103 ntBASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 RNU6-92P-201ENST00000605893 104 ntBASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 uc_338.6-201ENST00000613544 171 ntBASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MS4A3Q96HJ5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms