Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 Y_RNA.207-201ENST00000364142 106 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 RNU6-243P-201ENST00000391140 107 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 RNU6ATAC33P-201ENST00000408647 126 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 Y_RNA.606-201ENST00000410579 103 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 AL691482.2-201ENST00000457453 84 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 CYP3A52P-201ENST00000563326 91 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 MIR5680-201ENST00000577577 84 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 MIR3199-1-201ENST00000582434 88 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 AL161722.3-201ENST00000605789 2983 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 AC006111.3-201ENST00000622137 383 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VARS2Q5ST30 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VARS2Q5ST30 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
VARS2Q5ST30 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
VARS2Q5ST30 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
VARS2Q5ST30 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.59□□□□□ -1.83
VARS2Q5ST30 RNA5SP126-201ENST00000365092 109 ntBASIC3.59□□□□□ -1.83
VARS2Q5ST30 RNU6-1051P-201ENST00000365471 102 ntBASIC3.59□□□□□ -1.83
VARS2Q5ST30 MIR516A2-201ENST00000384888 90 ntBASIC3.59□□□□□ -1.83
VARS2Q5ST30 MIR516A1-201ENST00000385033 90 ntBASIC3.59□□□□□ -1.83
VARS2Q5ST30 HSPE1P9-201ENST00000440046 311 ntBASIC3.59□□□□□ -1.83
VARS2Q5ST30 AC006539.3-201ENST00000454258 129 ntBASIC3.59□□□□□ -1.83
VARS2Q5ST30 MIR4764-201ENST00000580680 88 ntBASIC3.59□□□□□ -1.83
VARS2Q5ST30 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.59□□□□□ -1.83
VARS2Q5ST30 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC3.59□□□□□ -1.83
VARS2Q5ST30 MIR6715A-201ENST00000615929 79 ntBASIC3.59□□□□□ -1.83
VARS2Q5ST30 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VARS2Q5ST30 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.58□□□□□ -1.84
VARS2Q5ST30 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
VARS2Q5ST30 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.58□□□□□ -1.84
VARS2Q5ST30 RNU6-1077P-201ENST00000410506 102 ntBASIC3.58□□□□□ -1.84
VARS2Q5ST30 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.58□□□□□ -1.84
VARS2Q5ST30 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.58□□□□□ -1.84
VARS2Q5ST30 AL109933.3-201ENST00000619095 188 ntBASIC3.58□□□□□ -1.84
VARS2Q5ST30 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.58□□□□□ -1.84
VARS2Q5ST30 AL137790.1-201ENST00000634283 177 ntBASIC3.58□□□□□ -1.84
VARS2Q5ST30 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VARS2Q5ST30 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VARS2Q5ST30 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.58□□□□□ -1.84
VARS2Q5ST30 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
VARS2Q5ST30 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
VARS2Q5ST30 RNA5SP117-201ENST00000365294 118 ntBASIC3.57□□□□□ -1.84
VARS2Q5ST30 RNU6-936P-201ENST00000384005 107 ntBASIC3.57□□□□□ -1.84
VARS2Q5ST30 RNU6-949P-201ENST00000384040 107 ntBASIC3.57□□□□□ -1.84
VARS2Q5ST30 RNU6-1072P-201ENST00000384703 107 ntBASIC3.57□□□□□ -1.84
VARS2Q5ST30 RNU6-443P-201ENST00000384780 107 ntBASIC3.57□□□□□ -1.84
VARS2Q5ST30 RNA5SP237-201ENST00000410414 113 ntBASIC3.57□□□□□ -1.84
VARS2Q5ST30 AC027119.1-201ENST00000440877 241 ntBASIC3.57□□□□□ -1.84
VARS2Q5ST30 RNA5SP341-201ENST00000516261 117 ntBASIC3.57□□□□□ -1.84
VARS2Q5ST30 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.57□□□□□ -1.84
VARS2Q5ST30 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VARS2Q5ST30 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.56□□□□□ -1.84
VARS2Q5ST30 AP000648.3-201ENST00000623539 4507 ntBASIC3.56□□□□□ -1.84
VARS2Q5ST30 RNA5SP493-201ENST00000364115 91 ntBASIC3.56□□□□□ -1.84
VARS2Q5ST30 RNU6-1187P-201ENST00000364771 110 ntBASIC3.56□□□□□ -1.84
VARS2Q5ST30 MIR561-201ENST00000385216 97 ntBASIC3.56□□□□□ -1.84
VARS2Q5ST30 SNORA11.4-201ENST00000408823 129 ntBASIC3.56□□□□□ -1.84
VARS2Q5ST30 SNORA70.19-201ENST00000516717 90 ntBASIC3.56□□□□□ -1.84
VARS2Q5ST30 MIR5004-201ENST00000579078 107 ntBASIC3.56□□□□□ -1.84
VARS2Q5ST30 AL662814.1-201ENST00000617364 121 ntBASIC3.56□□□□□ -1.84
VARS2Q5ST30 UCA1.1-201ENST00000620952 75 ntBASIC3.56□□□□□ -1.84
VARS2Q5ST30 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
VARS2Q5ST30 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.56□□□□□ -1.84
VARS2Q5ST30 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VARS2Q5ST30 SNORA5B-201ENST00000363786 132 ntBASIC3.55□□□□□ -1.84
VARS2Q5ST30 RNU6-1184P-201ENST00000384588 108 ntBASIC3.55□□□□□ -1.84
VARS2Q5ST30 MIR526A1-201ENST00000384897 85 ntBASIC3.55□□□□□ -1.84
VARS2Q5ST30 MIR4738-201ENST00000579134 87 ntBASIC3.55□□□□□ -1.84
VARS2Q5ST30 AC006023.1-201ENST00000603944 259 ntBASIC3.55□□□□□ -1.84
VARS2Q5ST30 MIR7106-201ENST00000612419 65 ntBASIC3.55□□□□□ -1.84
VARS2Q5ST30 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VARS2Q5ST30 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VARS2Q5ST30 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VARS2Q5ST30 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VARS2Q5ST30 MIR591-201ENST00000385290 95 ntBASIC3.54□□□□□ -1.84
VARS2Q5ST30 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VARS2Q5ST30 MIR3169-201ENST00000578032 83 ntBASIC3.54□□□□□ -1.84
VARS2Q5ST30 AC092634.7-201ENST00000621022 103 ntBASIC3.54□□□□□ -1.84
VARS2Q5ST30 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.54□□□□□ -1.84
VARS2Q5ST30 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.53□□□□□ -1.84
VARS2Q5ST30 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VARS2Q5ST30 RNU6-446P-201ENST00000362827 106 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 RNU6-957P-201ENST00000363652 99 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 MIR184-201ENST00000384962 84 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 SNORA26.7-201ENST00000391288 122 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 HMGN2P39-201ENST00000398005 273 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 RN7SKP220-201ENST00000410611 288 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 AC245517.4-201ENST00000448601 281 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 MIR4672-201ENST00000583126 81 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 AL355297.2-201ENST00000604792 129 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VARS2Q5ST30 RNVU1-4-201ENST00000612985 164 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 AC022513.1-201ENST00000624512 117 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 SNORA50A-202ENST00000629536 136 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 U6.109-201ENST00000636749 87 ntBASIC3.53□□□□□ -1.84
VARS2Q5ST30 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VARS2Q5ST30 RNY4P3-201ENST00000365254 95 ntBASIC3.52□□□□□ -1.85
VARS2Q5ST30 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VARS2Q5ST30 RNU6-604P-201ENST00000390917 100 ntBASIC3.52□□□□□ -1.85
VARS2Q5ST30 AC121758.2-201ENST00000553271 193 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms