Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.16□□□□□ -1.9
USP46P62068 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP46P62068 SNORA48.1-201ENST00000390879 135 ntBASIC3.15□□□□□ -1.91
USP46P62068 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.15□□□□□ -1.91
USP46P62068 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.15□□□□□ -1.91
USP46P62068 COTL1P1-201ENST00000422309 375 ntBASIC3.15□□□□□ -1.91
USP46P62068 AL139132.1-201ENST00000431587 344 ntBASIC3.15□□□□□ -1.91
USP46P62068 AC099513.1-201ENST00000490423 301 ntBASIC3.15□□□□□ -1.91
USP46P62068 SUB1P4-201ENST00000566062 339 ntBASIC3.15□□□□□ -1.91
USP46P62068 MIR8055-201ENST00000610739 97 ntBASIC3.15□□□□□ -1.91
USP46P62068 AC105081.1-201ENST00000617727 106 ntBASIC3.15□□□□□ -1.91
USP46P62068 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.15□□□□□ -1.91
USP46P62068 AC092435.3-201ENST00000565538 3654 ntBASIC3.15□□□□□ -1.91
USP46P62068 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
USP46P62068 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP46P62068 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP46P62068 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
USP46P62068 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP46P62068 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP46P62068 RNU6-112P-201ENST00000363599 104 ntBASIC3.14□□□□□ -1.91
USP46P62068 RNU6-457P-201ENST00000363999 107 ntBASIC3.14□□□□□ -1.91
USP46P62068 RNU6-1296P-201ENST00000383879 107 ntBASIC3.14□□□□□ -1.91
USP46P62068 RNU6-24P-201ENST00000384440 107 ntBASIC3.14□□□□□ -1.91
USP46P62068 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
USP46P62068 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.14□□□□□ -1.91
USP46P62068 RNA5SP501-201ENST00000410990 112 ntBASIC3.14□□□□□ -1.91
USP46P62068 EEF1A1P41-201ENST00000414667 207 ntBASIC3.14□□□□□ -1.91
USP46P62068 SPINT5P-201ENST00000448174 155 ntBASIC3.14□□□□□ -1.91
USP46P62068 RNU7-79P-201ENST00000516082 62 ntBASIC3.14□□□□□ -1.91
USP46P62068 RNA5SP481-201ENST00000516814 122 ntBASIC3.14□□□□□ -1.91
USP46P62068 SNORA74.3-201ENST00000517108 154 ntBASIC3.14□□□□□ -1.91
USP46P62068 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
USP46P62068 MIR6733-201ENST00000635723 61 ntBASIC3.14□□□□□ -1.91
USP46P62068 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
USP46P62068 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP46P62068 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP46P62068 Y_RNA.567-201ENST00000384736 106 ntBASIC3.13□□□□□ -1.91
USP46P62068 MIR548G-201ENST00000408442 89 ntBASIC3.13□□□□□ -1.91
USP46P62068 AC105272.1-201ENST00000438604 198 ntBASIC3.13□□□□□ -1.91
USP46P62068 SNORA59A-201ENST00000459326 152 ntBASIC3.13□□□□□ -1.91
USP46P62068 RN7SKP132-201ENST00000516001 208 ntBASIC3.13□□□□□ -1.91
USP46P62068 RNU6-90P-201ENST00000606352 106 ntBASIC3.13□□□□□ -1.91
USP46P62068 MIR8065-201ENST00000620577 100 ntBASIC3.13□□□□□ -1.91
USP46P62068 SCARNA4.1-201ENST00000628597 123 ntBASIC3.13□□□□□ -1.91
USP46P62068 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
USP46P62068 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP46P62068 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP46P62068 RNU6-296P-201ENST00000384608 107 ntBASIC3.12□□□□□ -1.91
USP46P62068 SNORA46-201ENST00000384762 135 ntBASIC3.12□□□□□ -1.91
USP46P62068 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP46P62068 AC022018.1-201ENST00000430685 241 ntBASIC3.12□□□□□ -1.91
USP46P62068 AC234781.5-201ENST00000508429 271 ntBASIC3.12□□□□□ -1.91
USP46P62068 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
USP46P62068 MIR424-201ENST00000362227 98 ntBASIC3.11□□□□□ -1.91
USP46P62068 RNU6-1244P-201ENST00000363614 108 ntBASIC3.11□□□□□ -1.91
USP46P62068 RNU6-1237P-201ENST00000384777 107 ntBASIC3.11□□□□□ -1.91
USP46P62068 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
USP46P62068 CYP3A52P-201ENST00000563326 91 ntBASIC3.11□□□□□ -1.91
USP46P62068 AC008133.2-201ENST00000624540 351 ntBASIC3.11□□□□□ -1.91
USP46P62068 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
USP46P62068 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
USP46P62068 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.1□□□□□ -1.91
USP46P62068 AL365361.1-201ENST00000566942 3481 ntBASIC3.1□□□□□ -1.91
USP46P62068 RNU6-633P-201ENST00000362612 103 ntBASIC3.1□□□□□ -1.91
USP46P62068 RNU6-1321P-201ENST00000390905 107 ntBASIC3.1□□□□□ -1.91
USP46P62068 AL023284.1-201ENST00000403956 276 ntBASIC3.1□□□□□ -1.91
USP46P62068 RNU6-602P-201ENST00000411155 105 ntBASIC3.1□□□□□ -1.91
USP46P62068 RNU1-98P-201ENST00000458992 160 ntBASIC3.1□□□□□ -1.91
USP46P62068 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.1□□□□□ -1.91
USP46P62068 SCARNA15.3-201ENST00000626315 122 ntBASIC3.1□□□□□ -1.91
USP46P62068 Z97988.1-201ENST00000637697 135 ntBASIC3.1□□□□□ -1.91
USP46P62068 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
USP46P62068 RNA5SP138-201ENST00000365098 114 ntBASIC3.09□□□□□ -1.91
USP46P62068 Y_RNA.607-201ENST00000410597 98 ntBASIC3.09□□□□□ -1.91
USP46P62068 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.09□□□□□ -1.91
USP46P62068 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.09□□□□□ -1.91
USP46P62068 MTND5P40-201ENST00000559945 246 ntBASIC3.09□□□□□ -1.91
USP46P62068 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.09□□□□□ -1.91
USP46P62068 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
USP46P62068 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
USP46P62068 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
USP46P62068 AL035425.3-201ENST00000564206 4996 ntBASIC3.08□□□□□ -1.92
USP46P62068 SNORD38.2-201ENST00000384470 69 ntBASIC3.08□□□□□ -1.92
USP46P62068 HMGN2P39-201ENST00000398005 273 ntBASIC3.08□□□□□ -1.92
USP46P62068 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.08□□□□□ -1.92
USP46P62068 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.08□□□□□ -1.92
USP46P62068 RNU7-43P-201ENST00000516554 64 ntBASIC3.08□□□□□ -1.92
USP46P62068 RNU7-137P-201ENST00000516788 62 ntBASIC3.08□□□□□ -1.92
USP46P62068 AC019288.1-201ENST00000557918 224 ntBASIC3.08□□□□□ -1.92
USP46P62068 MIR4764-201ENST00000580680 88 ntBASIC3.08□□□□□ -1.92
USP46P62068 MIR4658-201ENST00000584344 65 ntBASIC3.08□□□□□ -1.92
USP46P62068 MIR4662A-201ENST00000637499 67 ntBASIC3.08□□□□□ -1.92
USP46P62068 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.08□□□□□ -1.92
USP46P62068 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USP46P62068 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
USP46P62068 SNORD56.5-201ENST00000364281 72 ntBASIC3.07□□□□□ -1.92
USP46P62068 MIR520C-201ENST00000385005 87 ntBASIC3.07□□□□□ -1.92
USP46P62068 RPL31P63-201ENST00000422565 375 ntBASIC3.07□□□□□ -1.92
USP46P62068 MIR7106-201ENST00000612419 65 ntBASIC3.07□□□□□ -1.92
USP46P62068 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms