Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 SNORD113-1-201ENST00000365321 69 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 RNU6-1336P-201ENST00000383886 109 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 Y_RNA.547-201ENST00000384654 119 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 Y_RNA.584-201ENST00000391090 114 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 AC005908.1-201ENST00000468701 347 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 SNORA18.4-201ENST00000516440 124 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 RNU7-25P-201ENST00000516544 62 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 SNORD53B-201ENST00000577887 78 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 SNORA77B-201ENST00000578179 125 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 MIR3129-201ENST00000581095 76 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 AC134878.1-201ENST00000619901 243 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 AP001340.1-201ENST00000624405 217 ntBASIC1.85□□□□□ -2.11
VPS53Q5VIR6 Y_RNA.410-201ENST00000383992 113 ntBASIC1.84□□□□□ -2.11
VPS53Q5VIR6 Y_RNA.420-201ENST00000384043 110 ntBASIC1.84□□□□□ -2.11
VPS53Q5VIR6 MIR452-201ENST00000385020 85 ntBASIC1.84□□□□□ -2.11
VPS53Q5VIR6 SNORA40-201ENST00000388090 126 ntBASIC1.84□□□□□ -2.11
VPS53Q5VIR6 Y_RNA.586-201ENST00000391146 98 ntBASIC1.84□□□□□ -2.11
VPS53Q5VIR6 AC015922.2-201ENST00000435593 184 ntBASIC1.84□□□□□ -2.11
VPS53Q5VIR6 HSPE1P24-201ENST00000450782 238 ntBASIC1.84□□□□□ -2.11
VPS53Q5VIR6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS53Q5VIR6 BX248123.2-201ENST00000606318 124 ntBASIC1.84□□□□□ -2.11
VPS53Q5VIR6 SNORD3E-202ENST00000627253 216 ntBASIC1.84□□□□□ -2.11
VPS53Q5VIR6 SNORD115-28-201ENST00000363931 81 ntBASIC1.83□□□□□ -2.12
VPS53Q5VIR6 RNU1-42P-201ENST00000364033 160 ntBASIC1.83□□□□□ -2.12
VPS53Q5VIR6 MIR194-1-201ENST00000384892 85 ntBASIC1.83□□□□□ -2.12
VPS53Q5VIR6 SNORD77.3-201ENST00000391113 65 ntBASIC1.83□□□□□ -2.12
VPS53Q5VIR6 RNU6-257P-201ENST00000410238 98 ntBASIC1.83□□□□□ -2.12
VPS53Q5VIR6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS53Q5VIR6 AC091895.1-201ENST00000624494 256 ntBASIC1.83□□□□□ -2.12
VPS53Q5VIR6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VPS53Q5VIR6 ICE2P2-201ENST00000483823 2787 ntBASIC1.83□□□□□ -2.12
VPS53Q5VIR6 RNA5SP432-201ENST00000362480 116 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 Y_RNA.120-201ENST00000363304 110 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 RNY1P11-201ENST00000363759 113 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 RNU6-60P-201ENST00000364792 103 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 MIR320A-201ENST00000385302 82 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 RNU6-460P-201ENST00000391158 108 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 AL161935.2-201ENST00000414627 60 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 AF228730.3-201ENST00000436691 102 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 AC087499.4-201ENST00000448505 178 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 AC015726.2-201ENST00000620112 122 ntBASIC1.82□□□□□ -2.12
VPS53Q5VIR6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
VPS53Q5VIR6 AL157777.2-201ENST00000258070 137 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 Y_RNA.37-201ENST00000362606 108 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 SNORD33-201ENST00000362761 85 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 RNU6-203P-201ENST00000384038 104 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 RNU4-62P-201ENST00000410125 130 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 MTND4LP9-201ENST00000427694 174 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 AC108667.1-201ENST00000428618 249 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 RNU4-57P-201ENST00000515980 135 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 RNA5SP272-201ENST00000516095 111 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 RNA5SP458-201ENST00000516188 119 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 TUG1_4.1-201ENST00000619464 181 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 MIR8063-201ENST00000621930 81 ntBASIC1.81□□□□□ -2.12
VPS53Q5VIR6 Y_RNA.52-201ENST00000362760 96 ntBASIC1.8□□□□□ -2.12
VPS53Q5VIR6 MIR136-201ENST00000385207 82 ntBASIC1.8□□□□□ -2.12
VPS53Q5VIR6 AC004965.1-201ENST00000413033 213 ntBASIC1.8□□□□□ -2.12
VPS53Q5VIR6 AC093850.1-201ENST00000454121 251 ntBASIC1.8□□□□□ -2.12
VPS53Q5VIR6 RNU6-237P-201ENST00000515985 71 ntBASIC1.8□□□□□ -2.12
VPS53Q5VIR6 AP001328.1-201ENST00000528550 176 ntBASIC1.8□□□□□ -2.12
VPS53Q5VIR6 MIR4778-201ENST00000577635 80 ntBASIC1.8□□□□□ -2.12
VPS53Q5VIR6 MIR5197-201ENST00000583721 112 ntBASIC1.8□□□□□ -2.12
VPS53Q5VIR6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS53Q5VIR6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS53Q5VIR6 RNU6-1189P-201ENST00000383958 107 ntBASIC1.79□□□□□ -2.12
VPS53Q5VIR6 SNORA20-201ENST00000384662 132 ntBASIC1.79□□□□□ -2.12
VPS53Q5VIR6 SNORA67.6-201ENST00000391093 99 ntBASIC1.79□□□□□ -2.12
VPS53Q5VIR6 MIR1304-201ENST00000408243 91 ntBASIC1.79□□□□□ -2.12
VPS53Q5VIR6 AC245517.4-201ENST00000448601 281 ntBASIC1.79□□□□□ -2.12
VPS53Q5VIR6 AC023790.1-201ENST00000482174 347 ntBASIC1.79□□□□□ -2.12
VPS53Q5VIR6 U7.2-201ENST00000607576 63 ntBASIC1.79□□□□□ -2.12
VPS53Q5VIR6 RNU6-915P-201ENST00000364943 103 ntBASIC1.78□□□□□ -2.12
VPS53Q5VIR6 AL603914.1-201ENST00000401964 204 ntBASIC1.78□□□□□ -2.12
VPS53Q5VIR6 RNU6-938P-201ENST00000411285 103 ntBASIC1.78□□□□□ -2.12
VPS53Q5VIR6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS53Q5VIR6 AL354695.1-201ENST00000427935 228 ntBASIC1.78□□□□□ -2.12
VPS53Q5VIR6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.78□□□□□ -2.12
VPS53Q5VIR6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS53Q5VIR6 U2.22-201ENST00000636441 106 ntBASIC1.78□□□□□ -2.12
VPS53Q5VIR6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS53Q5VIR6 SNORD18B-201ENST00000365659 72 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 MIR539-201ENST00000365690 78 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 RNU6-959P-201ENST00000384671 107 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 MIR526A1-201ENST00000384897 85 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 MIR517C-201ENST00000385103 95 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 MTATP6P21-201ENST00000440681 189 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 AC079140.2-201ENST00000506193 142 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 RNA5SP445-201ENST00000515889 115 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 RNU2-60P-201ENST00000517290 128 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 AP003484.1-201ENST00000530974 250 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 AC095038.3-201ENST00000634439 195 ntBASIC1.77□□□□□ -2.13
VPS53Q5VIR6 AP000648.3-201ENST00000623539 4507 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 U8.1-201ENST00000362843 134 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 SNORD1A-201ENST00000364968 72 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 SNORA19-201ENST00000384737 128 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 MIR516B2-201ENST00000385190 85 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 SNORA67.5-201ENST00000391036 107 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms