Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RN7SKP123-201ENST00000410732 291 ntBASIC2.89□□□□□ -1.95
THBS1P07996 RNU6-860P-201ENST00000410860 104 ntBASIC2.89□□□□□ -1.95
THBS1P07996 RNU6-1217P-201ENST00000411276 104 ntBASIC2.89□□□□□ -1.95
THBS1P07996 RNU6-785P-201ENST00000411324 104 ntBASIC2.89□□□□□ -1.95
THBS1P07996 RNA5SP168-201ENST00000516642 112 ntBASIC2.89□□□□□ -1.95
THBS1P07996 U6.90-201ENST00000614007 104 ntBASIC2.89□□□□□ -1.95
THBS1P07996 AC243994.1-201ENST00000618627 109 ntBASIC2.89□□□□□ -1.95
THBS1P07996 U6.70-201ENST00000620287 104 ntBASIC2.89□□□□□ -1.95
THBS1P07996 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.89□□□□□ -1.95
THBS1P07996 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.89□□□□□ -1.95
THBS1P07996 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
THBS1P07996 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
THBS1P07996 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
THBS1P07996 RNA5SP374-201ENST00000362939 125 ntBASIC2.88□□□□□ -1.95
THBS1P07996 RNU6-1244P-201ENST00000363614 108 ntBASIC2.88□□□□□ -1.95
THBS1P07996 RNU6-865P-201ENST00000364772 107 ntBASIC2.88□□□□□ -1.95
THBS1P07996 SNORA7.4-201ENST00000384249 137 ntBASIC2.88□□□□□ -1.95
THBS1P07996 RNU4-47P-201ENST00000410876 114 ntBASIC2.88□□□□□ -1.95
THBS1P07996 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.88□□□□□ -1.95
THBS1P07996 RNU6-90P-201ENST00000606352 106 ntBASIC2.88□□□□□ -1.95
THBS1P07996 MIR622-201ENST00000638396 96 ntBASIC2.88□□□□□ -1.95
THBS1P07996 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
THBS1P07996 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
THBS1P07996 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
THBS1P07996 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.87□□□□□ -1.95
THBS1P07996 RNU1-58P-201ENST00000362413 163 ntBASIC2.87□□□□□ -1.95
THBS1P07996 SNORD21-201ENST00000383953 95 ntBASIC2.87□□□□□ -1.95
THBS1P07996 Y_RNA.537-201ENST00000384626 109 ntBASIC2.87□□□□□ -1.95
THBS1P07996 Y_RNA.567-201ENST00000384736 106 ntBASIC2.87□□□□□ -1.95
THBS1P07996 MIR519C-201ENST00000385053 87 ntBASIC2.87□□□□□ -1.95
THBS1P07996 MIR516B2-201ENST00000385190 85 ntBASIC2.87□□□□□ -1.95
THBS1P07996 UBL5P1-201ENST00000507979 193 ntBASIC2.87□□□□□ -1.95
THBS1P07996 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
THBS1P07996 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
THBS1P07996 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
THBS1P07996 Y_RNA.94-201ENST00000363068 106 ntBASIC2.86□□□□□ -1.95
THBS1P07996 RNU6-457P-201ENST00000363999 107 ntBASIC2.86□□□□□ -1.95
THBS1P07996 Y_RNA.247-201ENST00000364500 92 ntBASIC2.86□□□□□ -1.95
THBS1P07996 SNORD15B-201ENST00000384714 146 ntBASIC2.86□□□□□ -1.95
THBS1P07996 MIR206-201ENST00000384872 86 ntBASIC2.86□□□□□ -1.95
THBS1P07996 MIR548G-201ENST00000408442 89 ntBASIC2.86□□□□□ -1.95
THBS1P07996 RNA5SP274-201ENST00000410484 108 ntBASIC2.86□□□□□ -1.95
THBS1P07996 snoU13.16-201ENST00000459350 104 ntBASIC2.86□□□□□ -1.95
THBS1P07996 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.86□□□□□ -1.95
THBS1P07996 AC093729.1-201ENST00000513074 128 ntBASIC2.86□□□□□ -1.95
THBS1P07996 RNU7-35P-201ENST00000517174 62 ntBASIC2.86□□□□□ -1.95
THBS1P07996 MIR4712-201ENST00000583750 82 ntBASIC2.86□□□□□ -1.95
THBS1P07996 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
THBS1P07996 RNU6-461P-201ENST00000364195 107 ntBASIC2.85□□□□□ -1.95
THBS1P07996 RN7SL75P-201ENST00000461926 281 ntBASIC2.85□□□□□ -1.95
THBS1P07996 RN7SL863P-201ENST00000462370 296 ntBASIC2.85□□□□□ -1.95
THBS1P07996 SNORA31.26-201ENST00000517250 137 ntBASIC2.85□□□□□ -1.95
THBS1P07996 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.85□□□□□ -1.95
THBS1P07996 AC022513.1-201ENST00000624512 117 ntBASIC2.85□□□□□ -1.95
THBS1P07996 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
THBS1P07996 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
THBS1P07996 AC093831.2-201ENST00000624393 3427 ntBASIC2.84□□□□□ -1.95
THBS1P07996 RNU6-480P-201ENST00000384332 107 ntBASIC2.84□□□□□ -1.95
THBS1P07996 RNU6-913P-201ENST00000390913 95 ntBASIC2.84□□□□□ -1.95
THBS1P07996 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.84□□□□□ -1.95
THBS1P07996 AC245047.7-201ENST00000440265 293 ntBASIC2.84□□□□□ -1.95
THBS1P07996 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.84□□□□□ -1.95
THBS1P07996 RNU6-56P-201ENST00000516986 93 ntBASIC2.84□□□□□ -1.95
THBS1P07996 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.84□□□□□ -1.95
THBS1P07996 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.84□□□□□ -1.95
THBS1P07996 EIF4BP1-201ENST00000554881 351 ntBASIC2.84□□□□□ -1.95
THBS1P07996 AP000648.3-201ENST00000623539 4507 ntBASIC2.84□□□□□ -1.96
THBS1P07996 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
THBS1P07996 AC108206.1-201ENST00000570186 4159 ntBASIC2.83□□□□□ -1.96
THBS1P07996 RNU1-109P-201ENST00000383960 147 ntBASIC2.83□□□□□ -1.96
THBS1P07996 RNU6-1031P-201ENST00000384773 107 ntBASIC2.83□□□□□ -1.96
THBS1P07996 MIR887-201ENST00000401258 79 ntBASIC2.83□□□□□ -1.96
THBS1P07996 RN7SKP220-201ENST00000410611 288 ntBASIC2.83□□□□□ -1.96
THBS1P07996 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.83□□□□□ -1.96
THBS1P07996 SNORD123-201ENST00000459473 70 ntBASIC2.83□□□□□ -1.96
THBS1P07996 RN7SL20P-201ENST00000488827 297 ntBASIC2.83□□□□□ -1.96
THBS1P07996 AC234781.5-201ENST00000508429 271 ntBASIC2.83□□□□□ -1.96
THBS1P07996 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
THBS1P07996 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
THBS1P07996 SNORD114-10-201ENST00000363409 72 ntBASIC2.82□□□□□ -1.96
THBS1P07996 U8.9-201ENST00000365667 134 ntBASIC2.82□□□□□ -1.96
THBS1P07996 MIR34C-201ENST00000384831 77 ntBASIC2.82□□□□□ -1.96
THBS1P07996 RNU6-1190P-201ENST00000410811 104 ntBASIC2.82□□□□□ -1.96
THBS1P07996 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
THBS1P07996 RNU6-602P-201ENST00000411155 105 ntBASIC2.82□□□□□ -1.96
THBS1P07996 HSPE1P9-201ENST00000440046 311 ntBASIC2.82□□□□□ -1.96
THBS1P07996 Z96811.1-201ENST00000445880 108 ntBASIC2.82□□□□□ -1.96
THBS1P07996 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.82□□□□□ -1.96
THBS1P07996 MIR3124-201ENST00000582636 67 ntBASIC2.82□□□□□ -1.96
THBS1P07996 AC145423.2-201ENST00000610631 239 ntBASIC2.82□□□□□ -1.96
THBS1P07996 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.82□□□□□ -1.96
THBS1P07996 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.82□□□□□ -1.96
THBS1P07996 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
THBS1P07996 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.82□□□□□ -1.96
THBS1P07996 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
THBS1P07996 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
THBS1P07996 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
THBS1P07996 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
THBS1P07996 AC073325.2-201ENST00000339545 159 ntBASIC2.81□□□□□ -1.96
THBS1P07996 RNU6-315P-201ENST00000362666 107 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 516.4 ms