Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNA5SP385-201ENST00000515947 110 ntBASIC3.45□□□□□ -1.86
RNF40O75150 RNU6-917P-201ENST00000516294 104 ntBASIC3.45□□□□□ -1.86
RNF40O75150 RNU7-153P-201ENST00000516455 62 ntBASIC3.45□□□□□ -1.86
RNF40O75150 RNU6-539P-201ENST00000516665 103 ntBASIC3.45□□□□□ -1.86
RNF40O75150 MIR548AR-201ENST00000582191 57 ntBASIC3.45□□□□□ -1.86
RNF40O75150 MIR4298-201ENST00000584380 73 ntBASIC3.45□□□□□ -1.86
RNF40O75150 MIR4506-201ENST00000584693 77 ntBASIC3.45□□□□□ -1.86
RNF40O75150 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.45□□□□□ -1.86
RNF40O75150 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF40O75150 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF40O75150 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
RNF40O75150 RNU6-865P-201ENST00000364772 107 ntBASIC3.44□□□□□ -1.86
RNF40O75150 SNORA2B-201ENST00000384583 137 ntBASIC3.44□□□□□ -1.86
RNF40O75150 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RNF40O75150 RNA5SP341-201ENST00000516261 117 ntBASIC3.44□□□□□ -1.86
RNF40O75150 SNORA25.13-201ENST00000516395 103 ntBASIC3.44□□□□□ -1.86
RNF40O75150 RNU7-137P-201ENST00000516788 62 ntBASIC3.44□□□□□ -1.86
RNF40O75150 MIR8055-201ENST00000610739 97 ntBASIC3.44□□□□□ -1.86
RNF40O75150 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RNF40O75150 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF40O75150 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF40O75150 MIR136-201ENST00000385207 82 ntBASIC3.43□□□□□ -1.86
RNF40O75150 AC245047.7-201ENST00000440265 293 ntBASIC3.43□□□□□ -1.86
RNF40O75150 EIF4BP1-201ENST00000554881 351 ntBASIC3.43□□□□□ -1.86
RNF40O75150 MIR6852-201ENST00000621699 66 ntBASIC3.43□□□□□ -1.86
RNF40O75150 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF40O75150 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RNF40O75150 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF40O75150 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RNF40O75150 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF40O75150 RNU6-1019P-201ENST00000364424 107 ntBASIC3.42□□□□□ -1.86
RNF40O75150 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.42□□□□□ -1.86
RNF40O75150 AL034345.1-201ENST00000407768 123 ntBASIC3.42□□□□□ -1.86
RNF40O75150 RN7SKP123-201ENST00000410732 291 ntBASIC3.42□□□□□ -1.86
RNF40O75150 SNORD123-201ENST00000459473 70 ntBASIC3.42□□□□□ -1.86
RNF40O75150 AC005786.1-201ENST00000588553 154 ntBASIC3.42□□□□□ -1.86
RNF40O75150 RPL12P50-201ENST00000603116 116 ntBASIC3.42□□□□□ -1.86
RNF40O75150 AC069114.2-201ENST00000604699 304 ntBASIC3.42□□□□□ -1.86
RNF40O75150 AC012676.2-201ENST00000619258 186 ntBASIC3.42□□□□□ -1.86
RNF40O75150 AC006386.2-201ENST00000624491 75 ntBASIC3.42□□□□□ -1.86
RNF40O75150 AC012005.1-201ENST00000624575 75 ntBASIC3.42□□□□□ -1.86
RNF40O75150 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF40O75150 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RNF40O75150 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF40O75150 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNF40O75150 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF40O75150 SNORD114-10-201ENST00000363409 72 ntBASIC3.41□□□□□ -1.86
RNF40O75150 AL450471.1-201ENST00000447509 127 ntBASIC3.41□□□□□ -1.86
RNF40O75150 SPINT5P-201ENST00000448174 155 ntBASIC3.41□□□□□ -1.86
RNF40O75150 S100A11P2-201ENST00000467589 312 ntBASIC3.41□□□□□ -1.86
RNF40O75150 RNU7-12P-201ENST00000516030 62 ntBASIC3.41□□□□□ -1.86
RNF40O75150 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF40O75150 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
RNF40O75150 RNU6-1094P-201ENST00000362416 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 Y_RNA.537-201ENST00000384626 109 ntBASIC3.4□□□□□ -1.87
RNF40O75150 MIR526A1-201ENST00000384897 85 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-447P-201ENST00000410293 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-1118P-201ENST00000410382 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-1076P-201ENST00000410397 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-355P-201ENST00000410427 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-791P-201ENST00000410467 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-705P-201ENST00000410601 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-1100P-201ENST00000410691 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-860P-201ENST00000410860 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-1217P-201ENST00000411276 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-785P-201ENST00000411324 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 RNU6-557P-201ENST00000516842 110 ntBASIC3.4□□□□□ -1.87
RNF40O75150 U6.90-201ENST00000614007 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 U6.70-201ENST00000620287 104 ntBASIC3.4□□□□□ -1.87
RNF40O75150 AL161431.1-201ENST00000618966 4205 ntBASIC3.4□□□□□ -1.87
RNF40O75150 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF40O75150 Y_RNA.500-201ENST00000384466 111 ntBASIC3.39□□□□□ -1.87
RNF40O75150 MIR1236-201ENST00000408340 102 ntBASIC3.39□□□□□ -1.87
RNF40O75150 RNU6-519P-201ENST00000410590 108 ntBASIC3.39□□□□□ -1.87
RNF40O75150 RNU4-47P-201ENST00000410876 114 ntBASIC3.39□□□□□ -1.87
RNF40O75150 COTL1P1-201ENST00000422309 375 ntBASIC3.39□□□□□ -1.87
RNF40O75150 RNU7-48P-201ENST00000458875 63 ntBASIC3.39□□□□□ -1.87
RNF40O75150 Z97988.1-201ENST00000637697 135 ntBASIC3.39□□□□□ -1.87
RNF40O75150 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF40O75150 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF40O75150 HSBP1P2-201ENST00000299671 229 ntBASIC3.38□□□□□ -1.87
RNF40O75150 MIR422A-201ENST00000362286 90 ntBASIC3.38□□□□□ -1.87
RNF40O75150 RNU6-480P-201ENST00000384332 107 ntBASIC3.38□□□□□ -1.87
RNF40O75150 RNU6-1086P-201ENST00000410930 100 ntBASIC3.38□□□□□ -1.87
RNF40O75150 SCARNA18B-201ENST00000458806 135 ntBASIC3.38□□□□□ -1.87
RNF40O75150 UBE2DNL-203ENST00000474922 222 ntBASIC3.38□□□□□ -1.87
RNF40O75150 RPL23AP94-201ENST00000512518 302 ntBASIC3.38□□□□□ -1.87
RNF40O75150 RNU7-79P-201ENST00000516082 62 ntBASIC3.38□□□□□ -1.87
RNF40O75150 AC105081.1-201ENST00000617727 106 ntBASIC3.38□□□□□ -1.87
RNF40O75150 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF40O75150 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF40O75150 MIRLET7A1-201ENST00000362295 80 ntBASIC3.37□□□□□ -1.87
RNF40O75150 RNA5SP138-201ENST00000365098 114 ntBASIC3.37□□□□□ -1.87
RNF40O75150 RNU6-1031P-201ENST00000384773 107 ntBASIC3.37□□□□□ -1.87
RNF40O75150 AC093850.1-201ENST00000454121 251 ntBASIC3.37□□□□□ -1.87
RNF40O75150 SNORD4B-201ENST00000459083 72 ntBASIC3.37□□□□□ -1.87
RNF40O75150 snoU13.16-201ENST00000459350 104 ntBASIC3.37□□□□□ -1.87
RNF40O75150 MIR3134-201ENST00000579433 74 ntBASIC3.37□□□□□ -1.87
RNF40O75150 MIR4513-201ENST00000581077 86 ntBASIC3.37□□□□□ -1.87
RNF40O75150 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms