Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 AC103810.7-201ENST00000607821 91 ntBASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 MIR422A-201ENST00000362286 90 ntBASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 SNORA32-201ENST00000384072 121 ntBASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 SNORA48.8-201ENST00000391324 134 ntBASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 RNU6-958P-201ENST00000516995 106 ntBASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 AC007336.1-201ENST00000576365 3828 ntBASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 RNU6-86P-201ENST00000606534 107 ntBASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 MIR622-201ENST00000638396 96 ntBASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LYSMD3Q7Z3D4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LYSMD3Q7Z3D4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LYSMD3Q7Z3D4 RNU6-633P-201ENST00000362612 103 ntBASIC3.08□□□□□ -1.92
LYSMD3Q7Z3D4 SNORA54-201ENST00000384281 123 ntBASIC3.08□□□□□ -1.92
LYSMD3Q7Z3D4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.08□□□□□ -1.92
LYSMD3Q7Z3D4 UBL5P1-201ENST00000507979 193 ntBASIC3.08□□□□□ -1.92
LYSMD3Q7Z3D4 SNORA31.10-201ENST00000516482 106 ntBASIC3.08□□□□□ -1.92
LYSMD3Q7Z3D4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LYSMD3Q7Z3D4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 Y_RNA.316-201ENST00000365118 111 ntBASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 RNU6-1190P-201ENST00000410811 104 ntBASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 COTL1P1-201ENST00000422309 375 ntBASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 RPS12P2-201ENST00000439728 269 ntBASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 AC008885.1-201ENST00000514930 301 ntBASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 AC022513.1-201ENST00000624512 117 ntBASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 AL035425.3-201ENST00000564206 4996 ntBASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.07□□□□□ -1.92
LYSMD3Q7Z3D4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 AC073325.2-201ENST00000339545 159 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 RNU6-23P-201ENST00000363283 107 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 RNU6-833P-201ENST00000363486 107 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 RNU6-1163P-201ENST00000364516 107 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 SNORA1.2-201ENST00000365189 134 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 Y_RNA.370-201ENST00000365589 108 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 SNORA70.7-201ENST00000384159 133 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 U8.16-201ENST00000391279 133 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 SNORA11.4-201ENST00000408823 129 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 RNU7-67P-201ENST00000459003 62 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 RN7SL20P-201ENST00000488827 297 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 RNU7-53P-201ENST00000516705 60 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 RNU6-1006P-201ENST00000516998 103 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 MIR4513-201ENST00000581077 86 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 MIR6717-201ENST00000622747 73 ntBASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.06□□□□□ -1.92
LYSMD3Q7Z3D4 MIR22-201ENST00000362190 85 ntBASIC3.05□□□□□ -1.92
LYSMD3Q7Z3D4 Y_RNA.94-201ENST00000363068 106 ntBASIC3.05□□□□□ -1.92
LYSMD3Q7Z3D4 Y_RNA.140-201ENST00000363474 103 ntBASIC3.05□□□□□ -1.92
LYSMD3Q7Z3D4 MIR889-201ENST00000401280 79 ntBASIC3.05□□□□□ -1.92
LYSMD3Q7Z3D4 RNA5SP261-201ENST00000410536 106 ntBASIC3.05□□□□□ -1.92
LYSMD3Q7Z3D4 Y_RNA.609-201ENST00000410669 89 ntBASIC3.05□□□□□ -1.92
LYSMD3Q7Z3D4 UQCRHP3-201ENST00000451503 251 ntBASIC3.05□□□□□ -1.92
LYSMD3Q7Z3D4 EIF4BP1-201ENST00000554881 351 ntBASIC3.05□□□□□ -1.92
LYSMD3Q7Z3D4 DNAJC19P9-201ENST00000555084 351 ntBASIC3.05□□□□□ -1.92
LYSMD3Q7Z3D4 MIR4791-201ENST00000607666 84 ntBASIC3.05□□□□□ -1.92
LYSMD3Q7Z3D4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 MIR516B2-201ENST00000385190 85 ntBASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 RNA5SP344-201ENST00000411081 104 ntBASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 RPS29P29-201ENST00000456396 171 ntBASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 RPS29P12-201ENST00000460178 152 ntBASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 RNU7-2P-201ENST00000516096 62 ntBASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 SEPT14P17-201ENST00000617978 177 ntBASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LYSMD3Q7Z3D4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 RNU6-788P-201ENST00000390967 104 ntBASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 RN7SKP220-201ENST00000410611 288 ntBASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 HSPE1P9-201ENST00000440046 311 ntBASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.03□□□□□ -1.92
LYSMD3Q7Z3D4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
LYSMD3Q7Z3D4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 SNORD38.1-201ENST00000363863 68 ntBASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 SNORA71.1-201ENST00000364523 117 ntBASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 SNORA24-201ENST00000384096 131 ntBASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 RNU6-913P-201ENST00000390913 95 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms