Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.8□□□□□ -1.8
PRIM1P49642 AC096644.4-201ENST00000563417 2912 ntBASIC3.8□□□□□ -1.8
PRIM1P49642 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.79□□□□□ -1.8
PRIM1P49642 RNA5SP493-201ENST00000364115 91 ntBASIC3.79□□□□□ -1.8
PRIM1P49642 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PRIM1P49642 RNU6-679P-201ENST00000391003 106 ntBASIC3.79□□□□□ -1.8
PRIM1P49642 AC092185.1-201ENST00000491371 97 ntBASIC3.79□□□□□ -1.8
PRIM1P49642 RNA5SP217-201ENST00000515959 91 ntBASIC3.79□□□□□ -1.8
PRIM1P49642 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.79□□□□□ -1.8
PRIM1P49642 DNAJC19P9-201ENST00000555084 351 ntBASIC3.79□□□□□ -1.8
PRIM1P49642 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PRIM1P49642 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PRIM1P49642 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRIM1P49642 AC245060.5-201ENST00000610778 3293 ntBASIC3.78□□□□□ -1.8
PRIM1P49642 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.78□□□□□ -1.8
PRIM1P49642 RNU6-23P-201ENST00000363283 107 ntBASIC3.78□□□□□ -1.8
PRIM1P49642 AL034345.1-201ENST00000407768 123 ntBASIC3.78□□□□□ -1.8
PRIM1P49642 BTF3P4-201ENST00000418852 495 ntBASIC3.78□□□□□ -1.8
PRIM1P49642 RNU1-41P-201ENST00000516161 162 ntBASIC3.78□□□□□ -1.8
PRIM1P49642 RNU1-48P-201ENST00000516400 162 ntBASIC3.78□□□□□ -1.8
PRIM1P49642 AC026271.5-201ENST00000577873 130 ntBASIC3.78□□□□□ -1.8
PRIM1P49642 AC005786.1-201ENST00000588553 154 ntBASIC3.78□□□□□ -1.8
PRIM1P49642 SNORD3E-202ENST00000627253 216 ntBASIC3.78□□□□□ -1.8
PRIM1P49642 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.78□□□□□ -1.8
PRIM1P49642 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRIM1P49642 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRIM1P49642 SNORA1.1-201ENST00000364671 133 ntBASIC3.77□□□□□ -1.81
PRIM1P49642 RNU6-24P-201ENST00000384440 107 ntBASIC3.77□□□□□ -1.81
PRIM1P49642 RNU6-220P-201ENST00000390919 107 ntBASIC3.77□□□□□ -1.81
PRIM1P49642 RNU6-402P-201ENST00000410678 103 ntBASIC3.77□□□□□ -1.81
PRIM1P49642 RNU2-40P-201ENST00000410833 196 ntBASIC3.77□□□□□ -1.81
PRIM1P49642 AL513534.2-201ENST00000603836 250 ntBASIC3.77□□□□□ -1.81
PRIM1P49642 AC069114.2-201ENST00000604699 304 ntBASIC3.77□□□□□ -1.81
PRIM1P49642 AL512310.12-203ENST00000640543 90 ntBASIC3.77□□□□□ -1.81
PRIM1P49642 ICE2P2-201ENST00000483823 2787 ntBASIC3.77□□□□□ -1.81
PRIM1P49642 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRIM1P49642 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PRIM1P49642 AC009487.2-201ENST00000420969 6821 ntBASIC3.77□□□□□ -1.81
PRIM1P49642 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PRIM1P49642 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRIM1P49642 RNU6-1313P-201ENST00000362622 102 ntBASIC3.76□□□□□ -1.81
PRIM1P49642 SNORA22.1-201ENST00000362701 134 ntBASIC3.76□□□□□ -1.81
PRIM1P49642 RNU6-1019P-201ENST00000364424 107 ntBASIC3.76□□□□□ -1.81
PRIM1P49642 Y_RNA.430-201ENST00000384081 110 ntBASIC3.76□□□□□ -1.81
PRIM1P49642 AC104332.2-201ENST00000429959 156 ntBASIC3.76□□□□□ -1.81
PRIM1P49642 RNA5SP33-201ENST00000516687 98 ntBASIC3.76□□□□□ -1.81
PRIM1P49642 AC107016.2-201ENST00000547968 190 ntBASIC3.76□□□□□ -1.81
PRIM1P49642 MIR3169-201ENST00000578032 83 ntBASIC3.76□□□□□ -1.81
PRIM1P49642 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRIM1P49642 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRIM1P49642 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRIM1P49642 AP006437.1-201ENST00000641440 3685 ntBASIC3.75□□□□□ -1.81
PRIM1P49642 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRIM1P49642 MIR452-201ENST00000385020 85 ntBASIC3.75□□□□□ -1.81
PRIM1P49642 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.75□□□□□ -1.81
PRIM1P49642 MIRLET7C-201ENST00000362160 84 ntBASIC3.74□□□□□ -1.81
PRIM1P49642 Y_RNA.73-201ENST00000362910 113 ntBASIC3.74□□□□□ -1.81
PRIM1P49642 RNU1-112P-201ENST00000364401 164 ntBASIC3.74□□□□□ -1.81
PRIM1P49642 SNORA46-201ENST00000384762 135 ntBASIC3.74□□□□□ -1.81
PRIM1P49642 MIR29C-201ENST00000385231 88 ntBASIC3.74□□□□□ -1.81
PRIM1P49642 AL353813.1-201ENST00000440700 253 ntBASIC3.74□□□□□ -1.81
PRIM1P49642 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.74□□□□□ -1.81
PRIM1P49642 MIR4662A-201ENST00000637499 67 ntBASIC3.74□□□□□ -1.81
PRIM1P49642 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRIM1P49642 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRIM1P49642 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PRIM1P49642 SNORA9.2-201ENST00000365361 133 ntBASIC3.73□□□□□ -1.81
PRIM1P49642 RNU6-616P-201ENST00000384353 107 ntBASIC3.73□□□□□ -1.81
PRIM1P49642 RNA5SP109-201ENST00000391010 116 ntBASIC3.73□□□□□ -1.81
PRIM1P49642 MIR1262-201ENST00000408276 93 ntBASIC3.73□□□□□ -1.81
PRIM1P49642 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.73□□□□□ -1.81
PRIM1P49642 RNU6-521P-201ENST00000516663 105 ntBASIC3.73□□□□□ -1.81
PRIM1P49642 MIR4668-201ENST00000582284 70 ntBASIC3.73□□□□□ -1.81
PRIM1P49642 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.73□□□□□ -1.81
PRIM1P49642 MIR6841-201ENST00000637129 72 ntBASIC3.73□□□□□ -1.81
PRIM1P49642 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRIM1P49642 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PRIM1P49642 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PRIM1P49642 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PRIM1P49642 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRIM1P49642 Y_RNA.171-201ENST00000363760 102 ntBASIC3.72□□□□□ -1.81
PRIM1P49642 Y_RNA.221-201ENST00000364248 96 ntBASIC3.72□□□□□ -1.81
PRIM1P49642 RNU6-219P-201ENST00000364728 107 ntBASIC3.72□□□□□ -1.81
PRIM1P49642 Y_RNA.370-201ENST00000365589 108 ntBASIC3.72□□□□□ -1.81
PRIM1P49642 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.72□□□□□ -1.81
PRIM1P49642 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.72□□□□□ -1.81
PRIM1P49642 AL606517.2-201ENST00000442855 241 ntBASIC3.72□□□□□ -1.81
PRIM1P49642 AC008413.1-201ENST00000511864 177 ntBASIC3.72□□□□□ -1.81
PRIM1P49642 AC108729.3-201ENST00000513484 108 ntBASIC3.72□□□□□ -1.81
PRIM1P49642 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.72□□□□□ -1.81
PRIM1P49642 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.71□□□□□ -1.82
PRIM1P49642 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRIM1P49642 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PRIM1P49642 RNU6-1067P-201ENST00000384752 107 ntBASIC3.71□□□□□ -1.82
PRIM1P49642 MIR887-201ENST00000401258 79 ntBASIC3.71□□□□□ -1.82
PRIM1P49642 Y_RNA.620-201ENST00000411009 88 ntBASIC3.71□□□□□ -1.82
PRIM1P49642 AL513328.1-201ENST00000446460 224 ntBASIC3.71□□□□□ -1.82
PRIM1P49642 RPS29P29-201ENST00000456396 171 ntBASIC3.71□□□□□ -1.82
PRIM1P49642 RNU6-857P-201ENST00000515893 110 ntBASIC3.71□□□□□ -1.82
PRIM1P49642 SNORA31.4-201ENST00000516049 129 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms