Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RNU6-958P-201ENST00000516995 106 ntBASIC3.03□□□□□ -1.92
HRH3Q9Y5N1 DNAJC19P9-201ENST00000555084 351 ntBASIC3.03□□□□□ -1.92
HRH3Q9Y5N1 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.03□□□□□ -1.92
HRH3Q9Y5N1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.03□□□□□ -1.92
HRH3Q9Y5N1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.02□□□□□ -1.93
HRH3Q9Y5N1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HRH3Q9Y5N1 SNORD115-2-201ENST00000362842 82 ntBASIC3.02□□□□□ -1.93
HRH3Q9Y5N1 Y_RNA.171-201ENST00000363760 102 ntBASIC3.02□□□□□ -1.93
HRH3Q9Y5N1 SNORD115-20-201ENST00000365099 82 ntBASIC3.02□□□□□ -1.93
HRH3Q9Y5N1 Y_RNA.377-201ENST00000365644 108 ntBASIC3.02□□□□□ -1.93
HRH3Q9Y5N1 MIR136-201ENST00000385207 82 ntBASIC3.02□□□□□ -1.93
HRH3Q9Y5N1 RNA5SP168-201ENST00000516642 112 ntBASIC3.02□□□□□ -1.93
HRH3Q9Y5N1 MIR5094-201ENST00000578766 85 ntBASIC3.02□□□□□ -1.93
HRH3Q9Y5N1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HRH3Q9Y5N1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 SNORD56.3-201ENST00000363507 71 ntBASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 RNU6-1067P-201ENST00000384752 107 ntBASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 RNU6-972P-201ENST00000391208 107 ntBASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 RNU7-45P-201ENST00000459460 63 ntBASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 SNORA31.10-201ENST00000516482 106 ntBASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 AC245166.1-201ENST00000521012 253 ntBASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 AC104027.1-201ENST00000521887 300 ntBASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 MIR3126-201ENST00000577443 74 ntBASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 MIR5004-201ENST00000579078 107 ntBASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HRH3Q9Y5N1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3□□□□□ -1.93
HRH3Q9Y5N1 Y_RNA.95-201ENST00000363079 95 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 RNU1-91P-201ENST00000364746 163 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 RNU6-616P-201ENST00000384353 107 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 MIR516B2-201ENST00000385190 85 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 MIR634-201ENST00000385208 97 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 RNU6-679P-201ENST00000391003 106 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 RPS29P29-201ENST00000456396 171 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 HMGN1P18-201ENST00000457642 277 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3□□□□□ -1.93
HRH3Q9Y5N1 S100A11P2-201ENST00000467589 312 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 AC025521.1-201ENST00000621624 286 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3□□□□□ -1.93
HRH3Q9Y5N1 AC131280.1-202ENST00000624067 4211 ntBASIC3□□□□□ -1.93
HRH3Q9Y5N1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3□□□□□ -1.93
HRH3Q9Y5N1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 RNU6-1276P-201ENST00000365372 104 ntBASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 MIR627-201ENST00000384979 97 ntBASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 RNU6-887P-201ENST00000410660 100 ntBASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 SNORA31.4-201ENST00000516049 129 ntBASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 SCARNA20.6-201ENST00000517251 106 ntBASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 MIR548AE2-201ENST00000583456 67 ntBASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HRH3Q9Y5N1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 AC108206.1-201ENST00000570186 4159 ntBASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 RNU6-497P-201ENST00000365316 104 ntBASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 RNU1-109P-201ENST00000383960 147 ntBASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 RNU6-1201P-201ENST00000384227 107 ntBASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 SNORA11.2-201ENST00000408318 127 ntBASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 RNA5SP344-201ENST00000411081 104 ntBASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 RNU6-521P-201ENST00000516663 105 ntBASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 MIR2682-201ENST00000580305 110 ntBASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 MIR4325-201ENST00000583049 90 ntBASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 AC022513.1-201ENST00000624512 117 ntBASIC2.98□□□□□ -1.93
HRH3Q9Y5N1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HRH3Q9Y5N1 RNU11-3P-201ENST00000391111 133 ntBASIC2.97□□□□□ -1.93
HRH3Q9Y5N1 RNU2-7P-201ENST00000410794 178 ntBASIC2.97□□□□□ -1.93
HRH3Q9Y5N1 HSPE1P9-201ENST00000440046 311 ntBASIC2.97□□□□□ -1.93
HRH3Q9Y5N1 MIR4777-201ENST00000583710 86 ntBASIC2.97□□□□□ -1.93
HRH3Q9Y5N1 MIR4439-201ENST00000583746 80 ntBASIC2.97□□□□□ -1.93
HRH3Q9Y5N1 SNORD3E-202ENST00000627253 216 ntBASIC2.97□□□□□ -1.93
HRH3Q9Y5N1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HRH3Q9Y5N1 AC017071.1-201ENST00000564407 2204 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 RNU6-228P-201ENST00000362700 106 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 SNORA1.1-201ENST00000364671 133 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 U8.9-201ENST00000365667 134 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 Y_RNA.430-201ENST00000384081 110 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 Y_RNA.470-201ENST00000384307 117 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 BTF3P4-201ENST00000418852 495 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 RNU7-34P-201ENST00000459394 64 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 RNA5SP367-201ENST00000516557 118 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 EIF4BP1-201ENST00000554881 351 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 MIR548Z-201ENST00000584743 97 ntBASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.96□□□□□ -1.94
HRH3Q9Y5N1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HRH3Q9Y5N1 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
HRH3Q9Y5N1 MIR1255A-201ENST00000408338 113 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms