Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-166P-201ENST00000384371 107 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.28□□□□□ -2.61
COL12A1Q99715 AC117522.1-201ENST00000509821 380 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 MTND1P8-201ENST00000571424 950 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 AL020997.3-201ENST00000602843 359 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 MIR5683-201ENST00000636514 76 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 MTND1P35-201ENST00000526739 508 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.28□□□□□ -2.61
COL12A1Q99715 YWHAEP2-201ENST00000580066 112 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 MIR548AE1-201ENST00000583292 70 ntBASIC-1.28□□□□□ -2.61
COL12A1Q99715 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 AP000542.1-201ENST00000448473 371 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 AC116353.2-201ENST00000505332 712 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 RNU7-128P-201ENST00000517247 62 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.29□□□□□ -2.62
COL12A1Q99715 AC087683.1-201ENST00000591187 441 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 MIR539-201ENST00000365690 78 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 AC090844.1-201ENST00000422019 156 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 ZNF321P-202ENST00000550843 495 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 AL139418.1-201ENST00000613613 177 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.29□□□□□ -2.62
COL12A1Q99715 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 AC005345.1-201ENST00000431868 217 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 U8.22-201ENST00000459141 133 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.29□□□□□ -2.62
COL12A1Q99715 AL137161.1-201ENST00000532231 390 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 AP002795.1-201ENST00000534879 84 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 MTND5P40-201ENST00000559945 246 ntBASIC-1.29□□□□□ -2.62
COL12A1Q99715 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 RNA5SP201-201ENST00000410316 124 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 MTATP6P18-201ENST00000417994 673 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 AC236972.2-201ENST00000434979 310 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 MTND4P25-201ENST00000441039 533 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 AP001542.1-201ENST00000591314 200 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 RNU6-737P-201ENST00000365370 107 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 AL008987.1-201ENST00000415528 237 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 MTND2P22-201ENST00000444325 1033 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 AC074290.1-201ENST00000448883 135 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 snoU13.8-201ENST00000458890 104 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 MTCO1P31-201ENST00000506355 492 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 BNIP3P40-201ENST00000596017 556 ntBASIC-1.3□□□□□ -2.62
COL12A1Q99715 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 RNU6-855P-201ENST00000410395 104 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 MIR4491-201ENST00000581087 68 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 AC104458.1-201ENST00000608243 463 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 MIR6773-201ENST00000612812 74 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 MIR6740-201ENST00000618268 113 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 U4.1-201ENST00000620349 87 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 SNORD115-37-201ENST00000363768 82 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 RNU6-442P-201ENST00000383968 104 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 MIR544A-201ENST00000384855 91 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 SNORD28B-201ENST00000390993 75 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 Z83846.1-201ENST00000446798 265 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 snoU109.3-201ENST00000459477 145 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.31□□□□□ -2.62
COL12A1Q99715 AC025647.1-201ENST00000517879 253 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 MIR548AY-201ENST00000617669 107 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 AC069503.3-201ENST00000618674 145 ntBASIC-1.31□□□□□ -2.62
COL12A1Q99715 SNORD56.1-201ENST00000362913 68 ntBASIC-1.32□□□□□ -2.62
COL12A1Q99715 RNU6-924P-201ENST00000362926 108 ntBASIC-1.32□□□□□ -2.62
COL12A1Q99715 RNU6-106P-201ENST00000384405 107 ntBASIC-1.32□□□□□ -2.62
COL12A1Q99715 AC007547.1-201ENST00000462177 490 ntBASIC-1.32□□□□□ -2.62
COL12A1Q99715 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.32□□□□□ -2.62
COL12A1Q99715 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.32□□□□□ -2.62
COL12A1Q99715 RNU6-562P-201ENST00000362731 107 ntBASIC-1.32□□□□□ -2.62
COL12A1Q99715 RNU6-378P-201ENST00000384324 107 ntBASIC-1.32□□□□□ -2.62
COL12A1Q99715 Z98949.2-201ENST00000440996 144 ntBASIC-1.32□□□□□ -2.62
COL12A1Q99715 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.32□□□□□ -2.62
COL12A1Q99715 AC013437.2-201ENST00000639587 677 ntBASIC-1.32□□□□□ -2.62
COL12A1Q99715 U6.73-201ENST00000619194 103 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 MTND1P7-201ENST00000632801 297 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 RNU6-766P-201ENST00000362478 107 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 RNU6-828P-201ENST00000364876 107 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 RNU6-80P-201ENST00000384195 107 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 RNU6-21P-201ENST00000384710 107 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 AL603914.1-201ENST00000401964 204 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 MTCYBP2-201ENST00000407745 171 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.33□□□□□ -2.62
COL12A1Q99715 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 RNU7-13P-201ENST00000516413 62 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 MIR4464-201ENST00000580818 92 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 AC022306.3-201ENST00000619930 550 ntBASIC-1.33□□□□□ -2.62
COL12A1Q99715 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms