Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HMCN1Q96RW7 MIR378A-201ENST00000362177 66 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 Y_RNA.247-201ENST00000364500 92 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 MIR548C-201ENST00000384815 97 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 RNA5SP425-201ENST00000410336 112 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 CST2P1-201ENST00000425770 87 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 MTATP6P21-201ENST00000440681 189 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.88□□□□□ -2.27
HMCN1Q96RW7 AL035551.1-201ENST00000446931 348 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 RNY4P25-201ENST00000459254 96 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.88□□□□□ -2.27
HMCN1Q96RW7 AC009094.1-201ENST00000564443 426 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 MIR4305-201ENST00000583252 102 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 MIR4499-201ENST00000584834 69 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 RNU6-84P-201ENST00000607737 102 ntBASIC0.88□□□□□ -2.27
HMCN1Q96RW7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC0.88□□□□□ -2.27
HMCN1Q96RW7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HMCN1Q96RW7 SNORA31-201ENST00000362607 130 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-978P-201ENST00000364371 103 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 Y_RNA.327-201ENST00000365201 102 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 Y_RNA.551-201ENST00000384661 102 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC024067.1-201ENST00000426199 223 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC004263.1-201ENST00000479327 332 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RPL21P93-201ENST00000480465 489 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MRPS17P9-201ENST00000511924 393 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 HIF1AP1-201ENST00000553642 175 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MIR4778-201ENST00000577635 80 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MIR4796-201ENST00000580742 81 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MIR4491-201ENST00000581087 68 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MIR3675-201ENST00000583661 73 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC005828.6-201ENST00000606610 232 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MIR202-201ENST00000362219 110 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-492P-201ENST00000363035 104 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 Y_RNA.99-201ENST00000363138 105 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-643P-201ENST00000384018 107 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-260P-201ENST00000384092 107 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 CALM2P4-201ENST00000430810 426 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RPEP5-201ENST00000441137 268 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RPL37P4-201ENST00000448908 268 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 HSPE1P24-201ENST00000450782 238 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 SNRPGP8-201ENST00000454064 226 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 Y_RNA.690-201ENST00000516603 95 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 IGLV3-26-201ENST00000520756 302 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC024619.4-201ENST00000580924 316 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 Z83818.1-201ENST00000603584 150 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AL591424.2-201ENST00000617023 128 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC130454.1-201ENST00000622948 401 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNA5SP88-201ENST00000365560 109 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-1336P-201ENST00000383886 109 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 SNORA24-201ENST00000384096 131 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-882P-201ENST00000391025 103 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-1177P-201ENST00000391058 104 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 DEFB130D-201ENST00000426866 237 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 HMGN2P27-201ENST00000427352 270 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MED13P1-201ENST00000428342 171 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 U8.22-201ENST00000459141 133 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC004801.2-202ENST00000463559 283 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC025554.1-201ENST00000505641 188 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNA5SP121-201ENST00000516537 101 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU2-19P-201ENST00000517288 84 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 TUG1_2.1-201ENST00000614234 87 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 U6.97-201ENST00000636904 101 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-1289P-201ENST00000384431 106 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MIR520D-201ENST00000385002 87 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 CHEK2P4-201ENST00000450340 246 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-322P-201ENST00000516010 103 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-453P-201ENST00000516819 85 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 MIR548AG2-201ENST00000581228 64 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC010525.2-201ENST00000590920 195 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC021506.2-201ENST00000612354 169 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 Y_RNA.100-201ENST00000363141 102 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RNU6-831P-201ENST00000384548 107 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AP1B1P2-201ENST00000416196 106 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 RPL21P103-201ENST00000479921 488 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.87□□□□□ -2.27
HMCN1Q96RW7 HMGN2P15-201ENST00000585707 270 ntBASIC0.87□□□□□ -2.27
HMCN1Q96RW7 SNORA28-201ENST00000606769 126 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms