Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SHISA4Q96DD7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
SHISA4Q96DD7 RNU1-17P-201ENST00000363022 152 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 RNY4P6-201ENST00000363667 96 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 Y_RNA.198-201ENST00000364013 98 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 RNU1-138P-201ENST00000384093 164 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 SNORA51.5-201ENST00000384126 131 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 SNORA8-201ENST00000384574 139 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 U8.13-201ENST00000390842 128 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 HMGN2P35-201ENST00000412164 270 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 AC092427.1-202ENST00000430569 476 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 AC104389.3-201ENST00000445629 235 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 RNU6-295P-201ENST00000516901 104 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 RNU7-70P-201ENST00000516941 66 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 AC024995.1-201ENST00000523014 93 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 MIR5007-201ENST00000583098 95 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.66□□□□□ -1.98
SHISA4Q96DD7 U6.108-201ENST00000637764 58 ntBASIC2.66□□□□□ -1.98
SHISA4Q96DD7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.66□□□□□ -1.98
SHISA4Q96DD7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.66□□□□□ -1.98
SHISA4Q96DD7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SHISA4Q96DD7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.65□□□□□ -1.98
SHISA4Q96DD7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHISA4Q96DD7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SHISA4Q96DD7 SNORA1B-201ENST00000362535 133 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 SNORD14E-201ENST00000364009 85 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.213-201ENST00000364178 111 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 SNORA2.2-201ENST00000365473 135 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 RNU6-1189P-201ENST00000383958 107 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 RNU6-442P-201ENST00000383968 104 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.549-201ENST00000384657 102 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 MIR548O-201ENST00000408583 114 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 RNA5SP181-201ENST00000410246 98 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 RNU1-131P-201ENST00000458943 161 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 RNU6-240P-201ENST00000516098 97 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.65□□□□□ -1.99
SHISA4Q96DD7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.65□□□□□ -1.99
SHISA4Q96DD7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SHISA4Q96DD7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.65□□□□□ -1.99
SHISA4Q96DD7 RNU6-1084P-201ENST00000362498 107 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 SNORD68-201ENST00000363214 84 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.328-201ENST00000365208 113 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 RNU6-1014P-201ENST00000383940 103 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.466-201ENST00000384294 113 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 SNORA26.9-201ENST00000391322 122 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 AL117342.1-201ENST00000404861 406 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 SUMO1P4-201ENST00000429430 302 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 AC099677.2-201ENST00000436385 175 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.64□□□□□ -1.99
SHISA4Q96DD7 RNU6-94P-201ENST00000607728 107 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 AC006441.5-201ENST00000612680 209 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 AP001318.4-201ENST00000616637 121 ntBASIC2.64□□□□□ -1.99
SHISA4Q96DD7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
SHISA4Q96DD7 SNORA63.5-201ENST00000363548 123 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 U8.6-201ENST00000364939 135 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 RNU6-690P-201ENST00000365242 106 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 SNORA67.3-201ENST00000384366 140 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 RNU6-905P-201ENST00000384434 107 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 RNY4P29-201ENST00000410801 97 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 HMGN2P32-201ENST00000444648 269 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 RPL39P34-201ENST00000477141 156 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 RNU6-762P-201ENST00000517107 102 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 MIR5194-201ENST00000582634 120 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 MIR6766-201ENST00000622641 72 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 MIR376A2-201ENST00000636782 80 ntBASIC2.63□□□□□ -1.99
SHISA4Q96DD7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.63□□□□□ -1.99
SHISA4Q96DD7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.62□□□□□ -1.99
SHISA4Q96DD7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SHISA4Q96DD7 SNORD115-28-201ENST00000363931 81 ntBASIC2.62□□□□□ -1.99
SHISA4Q96DD7 snoU2-30.1-201ENST00000365012 70 ntBASIC2.62□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.323-201ENST00000365157 109 ntBASIC2.62□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.348-201ENST00000365403 103 ntBASIC2.62□□□□□ -1.99
SHISA4Q96DD7 RNU6-160P-201ENST00000384591 107 ntBASIC2.62□□□□□ -1.99
SHISA4Q96DD7 CST2P1-201ENST00000425770 87 ntBASIC2.62□□□□□ -1.99
SHISA4Q96DD7 AC018868.1-201ENST00000491307 315 ntBASIC2.62□□□□□ -1.99
SHISA4Q96DD7 RNU6-826P-201ENST00000516827 104 ntBASIC2.62□□□□□ -1.99
SHISA4Q96DD7 MIR4762-201ENST00000585261 75 ntBASIC2.62□□□□□ -1.99
SHISA4Q96DD7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHISA4Q96DD7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
SHISA4Q96DD7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.61□□□□□ -1.99
SHISA4Q96DD7 SNORA25B-201ENST00000365507 128 ntBASIC2.61□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.544-201ENST00000384650 113 ntBASIC2.61□□□□□ -1.99
SHISA4Q96DD7 AL023284.1-201ENST00000403956 276 ntBASIC2.61□□□□□ -1.99
SHISA4Q96DD7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.61□□□□□ -1.99
SHISA4Q96DD7 SNORA40.13-201ENST00000516379 120 ntBASIC2.61□□□□□ -1.99
SHISA4Q96DD7 MIR3616-201ENST00000584070 92 ntBASIC2.61□□□□□ -1.99
SHISA4Q96DD7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SHISA4Q96DD7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.61□□□□□ -1.99
SHISA4Q96DD7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SHISA4Q96DD7 AL596211.1-201ENST00000569873 2277 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.37-201ENST00000362606 108 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 RNU6-640P-201ENST00000363693 105 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 RNU6-414P-201ENST00000363705 104 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 SNORD114-6-201ENST00000364393 72 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 U8.5-201ENST00000364528 136 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 MIR489-201ENST00000384923 84 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 RNU6-220P-201ENST00000390919 107 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms