Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 Y_RNA.587-201ENST00000391210 103 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 RNU6-588P-201ENST00000410281 105 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 RNU6-735P-201ENST00000410612 107 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 RNU2-40P-201ENST00000410833 196 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 AC008267.6-201ENST00000441664 139 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 SNRPGP8-201ENST00000454064 226 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 RPS27P22-201ENST00000478056 241 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.71□□□□□ -2.14
SNED1Q8TER0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.71□□□□□ -2.14
SNED1Q8TER0 RNU6-971P-201ENST00000516920 106 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 U1.36-201ENST00000620684 176 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.71□□□□□ -2.14
SNED1Q8TER0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SNED1Q8TER0 RNU4-41P-201ENST00000364426 143 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 RNU6-342P-201ENST00000384521 104 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 RNU6-1235P-201ENST00000384559 107 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 RNU6-768P-201ENST00000384683 107 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 RNA5SP465-201ENST00000391195 109 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 SNORA79-201ENST00000408376 140 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 RNU2-32P-201ENST00000411193 191 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 AC008134.1-201ENST00000420943 193 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 AC244636.1-201ENST00000421152 228 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 AC010154.1-201ENST00000425857 269 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.7□□□□□ -2.14
SNED1Q8TER0 AC016925.1-201ENST00000458303 298 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 RNU6-437P-201ENST00000459408 95 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 RNU6-498P-201ENST00000459468 107 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 AC018630.3-201ENST00000542637 96 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 AC127455.1-201ENST00000565496 145 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 MIR3646-201ENST00000578301 84 ntBASIC1.7□□□□□ -2.14
SNED1Q8TER0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SNED1Q8TER0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SNED1Q8TER0 Y_RNA.36-201ENST00000362602 112 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 Y_RNA.71-201ENST00000362892 104 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 Y_RNA.261-201ENST00000364631 102 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 MIR539-201ENST00000365690 78 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 Y_RNA.420-201ENST00000384043 110 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 RNA5SP496-201ENST00000391240 109 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 MIR1304-201ENST00000408243 91 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 MIR1278-201ENST00000408753 81 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 RPS27P1-201ENST00000450552 247 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 AC010531.2-201ENST00000465012 153 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.69□□□□□ -2.14
SNED1Q8TER0 RNU6-1234P-201ENST00000516877 103 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 AL359881.1-201ENST00000602916 267 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 TUG1_4.1-201ENST00000619464 181 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 AC006435.5-201ENST00000624486 112 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 AC080100.1-201ENST00000624239 5356 ntBASIC1.69□□□□□ -2.14
SNED1Q8TER0 RNU6-674P-201ENST00000363831 107 ntBASIC1.68□□□□□ -2.14
SNED1Q8TER0 SNORD45.3-201ENST00000363836 72 ntBASIC1.68□□□□□ -2.14
SNED1Q8TER0 RNU6-1080P-201ENST00000383982 107 ntBASIC1.68□□□□□ -2.14
SNED1Q8TER0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SNED1Q8TER0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.68□□□□□ -2.14
SNED1Q8TER0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.68□□□□□ -2.14
SNED1Q8TER0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.68□□□□□ -2.14
SNED1Q8TER0 AC092991.1-201ENST00000477176 376 ntBASIC1.68□□□□□ -2.14
SNED1Q8TER0 RNU2-56P-201ENST00000516826 190 ntBASIC1.68□□□□□ -2.14
SNED1Q8TER0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.68□□□□□ -2.14
SNED1Q8TER0 AC011603.4-201ENST00000611325 277 ntBASIC1.68□□□□□ -2.14
SNED1Q8TER0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SNED1Q8TER0 Y_RNA.127-201ENST00000363386 109 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 Y_RNA.218-201ENST00000364218 104 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 Y_RNA.393-201ENST00000383936 102 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 SNORA40.6-201ENST00000391153 128 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 RNU6-460P-201ENST00000391158 108 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 MIR1253-201ENST00000408273 105 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 RNU4-43P-201ENST00000410628 137 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 Y_RNA.629-201ENST00000411368 105 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 SRIP3-201ENST00000413200 219 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.67□□□□□ -2.14
SNED1Q8TER0 AC023449.1-201ENST00000454464 154 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 RNU6-1333P-201ENST00000516162 93 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 RNU2-34P-201ENST00000516534 121 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 MIR378D2-201ENST00000580636 98 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 AL049861.1-201ENST00000603130 150 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.67□□□□□ -2.14
SNED1Q8TER0 AC245060.5-201ENST00000610778 3293 ntBASIC1.67□□□□□ -2.14
SNED1Q8TER0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.67□□□□□ -2.14
SNED1Q8TER0 Y_RNA.81-201ENST00000362997 102 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 Y_RNA.205-201ENST00000364128 113 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 RNA5SP205-201ENST00000364653 136 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 RNU6-117P-201ENST00000365415 107 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 SNORA72-201ENST00000384339 132 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 SNORA8-201ENST00000384574 139 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 AC016909.1-201ENST00000415916 166 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 RNU7-197P-201ENST00000458836 62 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 AC093259.1-201ENST00000509755 300 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 RNU7-172P-201ENST00000517125 64 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 AP001328.1-201ENST00000528550 176 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.66□□□□□ -2.14
SNED1Q8TER0 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 MIR2681-201ENST00000581814 105 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 MIR4438-201ENST00000585271 93 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 AL929325.1-201ENST00000603096 117 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 RNU6-1082P-201ENST00000364574 107 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.66□□□□□ -2.14
SNED1Q8TER0 RNU6-80P-201ENST00000384195 107 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 SNORD20-201ENST00000384550 80 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 RNU2-48P-201ENST00000410694 191 ntBASIC1.66□□□□□ -2.14
SNED1Q8TER0 RNU2-55P-201ENST00000411146 174 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 251.8 ms