Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 Y_RNA.96-201ENST00000363092 109 ntBASIC2.62□□□□□ -1.99
ATG4DQ86TL0 SNORA26.7-201ENST00000391288 122 ntBASIC2.62□□□□□ -1.99
ATG4DQ86TL0 AL139132.1-201ENST00000431587 344 ntBASIC2.62□□□□□ -1.99
ATG4DQ86TL0 RNU7-94P-201ENST00000459576 63 ntBASIC2.62□□□□□ -1.99
ATG4DQ86TL0 RNU6-998P-201ENST00000515894 101 ntBASIC2.62□□□□□ -1.99
ATG4DQ86TL0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.62□□□□□ -1.99
ATG4DQ86TL0 ELOCP29-201ENST00000588193 334 ntBASIC2.62□□□□□ -1.99
ATG4DQ86TL0 AL353149.1-201ENST00000610667 244 ntBASIC2.62□□□□□ -1.99
ATG4DQ86TL0 SCARNA15.3-201ENST00000626315 122 ntBASIC2.62□□□□□ -1.99
ATG4DQ86TL0 SCARNA4.1-201ENST00000628597 123 ntBASIC2.62□□□□□ -1.99
ATG4DQ86TL0 AL161431.1-201ENST00000618966 4205 ntBASIC2.62□□□□□ -1.99
ATG4DQ86TL0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATG4DQ86TL0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ATG4DQ86TL0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ATG4DQ86TL0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.377-201ENST00000365644 108 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 RNU6-851P-201ENST00000384565 107 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 MIR512-1-201ENST00000384913 84 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.61□□□□□ -1.99
ATG4DQ86TL0 AC022018.1-201ENST00000430685 241 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 AC069257.2-201ENST00000441819 155 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 AL606517.2-201ENST00000442855 241 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 RNU7-113P-201ENST00000459273 62 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 MIR1270-201ENST00000459320 83 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 ZNF861P-201ENST00000588126 639 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.61□□□□□ -1.99
ATG4DQ86TL0 MAPK10-322ENST00000641485 4530 ntBASIC2.61□□□□□ -1.99
ATG4DQ86TL0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 SNORA25.6-201ENST00000364121 118 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 U8.9-201ENST00000365667 134 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.470-201ENST00000384307 117 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 MIR592-201ENST00000384959 97 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 MIR95-201ENST00000385072 81 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 RNU2-40P-201ENST00000410833 196 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 MICF-203ENST00000432679 129 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 AC114811.1-201ENST00000507207 168 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 MIR7106-201ENST00000612419 65 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 MIR548BB-201ENST00000626714 66 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 AC245060.5-201ENST00000610778 3293 ntBASIC2.6□□□□□ -1.99
ATG4DQ86TL0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ATG4DQ86TL0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4DQ86TL0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATG4DQ86TL0 Y_RNA.299-201ENST00000364973 94 ntBASIC2.59□□□□□ -1.99
ATG4DQ86TL0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG4DQ86TL0 AL135938.1-201ENST00000443141 297 ntBASIC2.59□□□□□ -1.99
ATG4DQ86TL0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG4DQ86TL0 RNU7-96P-201ENST00000459535 64 ntBASIC2.59□□□□□ -1.99
ATG4DQ86TL0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG4DQ86TL0 RNU6-667P-201ENST00000517186 102 ntBASIC2.59□□□□□ -1.99
ATG4DQ86TL0 AC090821.2-201ENST00000523552 176 ntBASIC2.59□□□□□ -1.99
ATG4DQ86TL0 MIR548AE2-201ENST00000583456 67 ntBASIC2.59□□□□□ -1.99
ATG4DQ86TL0 AC103810.6-201ENST00000606708 136 ntBASIC2.59□□□□□ -1.99
ATG4DQ86TL0 AL512310.12-203ENST00000640543 90 ntBASIC2.59□□□□□ -1.99
ATG4DQ86TL0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ATG4DQ86TL0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.58□□□□□ -2
ATG4DQ86TL0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.58□□□□□ -2
ATG4DQ86TL0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.58□□□□□ -2
ATG4DQ86TL0 RNU6-862P-201ENST00000362804 105 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 SNORD58A-201ENST00000383875 65 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 U8.15-201ENST00000390947 134 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 RNU2-63P-201ENST00000410792 194 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 CYP2C59P-201ENST00000457790 269 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 RN7SKP132-201ENST00000516001 208 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 RNU6-1018P-201ENST00000516577 106 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 RNA5SP33-201ENST00000516687 98 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 SNORA48.11-201ENST00000517015 89 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 RNU7-181P-201ENST00000517234 74 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 MIR376B-201ENST00000614515 100 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 MIR7157-201ENST00000635801 60 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 AC108206.1-201ENST00000570186 4159 ntBASIC2.58□□□□□ -2
ATG4DQ86TL0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATG4DQ86TL0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.58□□□□□ -2
ATG4DQ86TL0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
ATG4DQ86TL0 SNORA5B-201ENST00000363786 132 ntBASIC2.57□□□□□ -2
ATG4DQ86TL0 RNA5SP482-201ENST00000391269 118 ntBASIC2.57□□□□□ -2
ATG4DQ86TL0 AC245047.3-201ENST00000429428 127 ntBASIC2.57□□□□□ -2
ATG4DQ86TL0 AC024995.1-201ENST00000523014 93 ntBASIC2.57□□□□□ -2
ATG4DQ86TL0 AC007536.1-201ENST00000533382 349 ntBASIC2.57□□□□□ -2
ATG4DQ86TL0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.57□□□□□ -2
ATG4DQ86TL0 AL355297.2-201ENST00000604792 129 ntBASIC2.57□□□□□ -2
ATG4DQ86TL0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ATG4DQ86TL0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.57□□□□□ -2
ATG4DQ86TL0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ATG4DQ86TL0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.56□□□□□ -2
ATG4DQ86TL0 SNORD116-10-201ENST00000363791 102 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 Y_RNA.247-201ENST00000364500 92 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 RNU6-163P-201ENST00000384396 106 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 RNA5SP109-201ENST00000391010 116 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms