Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RC3H1Q5TC82 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RC3H1Q5TC82 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RC3H1Q5TC82 SNORA70B-201ENST00000384210 135 ntBASIC3.57□□□□□ -1.84
RC3H1Q5TC82 SNORA27-201ENST00000384323 126 ntBASIC3.57□□□□□ -1.84
RC3H1Q5TC82 Y_RNA.607-201ENST00000410597 98 ntBASIC3.57□□□□□ -1.84
RC3H1Q5TC82 RPS29P12-201ENST00000460178 152 ntBASIC3.57□□□□□ -1.84
RC3H1Q5TC82 ICE2P2-201ENST00000483823 2787 ntBASIC3.57□□□□□ -1.84
RC3H1Q5TC82 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.57□□□□□ -1.84
RC3H1Q5TC82 MIR4439-201ENST00000583746 80 ntBASIC3.57□□□□□ -1.84
RC3H1Q5TC82 AC096720.1-201ENST00000604441 183 ntBASIC3.57□□□□□ -1.84
RC3H1Q5TC82 MIR6817-201ENST00000615588 66 ntBASIC3.57□□□□□ -1.84
RC3H1Q5TC82 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RC3H1Q5TC82 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RC3H1Q5TC82 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RC3H1Q5TC82 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RC3H1Q5TC82 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.56□□□□□ -1.84
RC3H1Q5TC82 RNU6-509P-201ENST00000363519 107 ntBASIC3.56□□□□□ -1.84
RC3H1Q5TC82 Y_RNA.191-201ENST00000363972 113 ntBASIC3.56□□□□□ -1.84
RC3H1Q5TC82 SNORA8-201ENST00000384574 139 ntBASIC3.56□□□□□ -1.84
RC3H1Q5TC82 RNA5SP323-201ENST00000391094 133 ntBASIC3.56□□□□□ -1.84
RC3H1Q5TC82 RNU6-998P-201ENST00000515894 101 ntBASIC3.56□□□□□ -1.84
RC3H1Q5TC82 SCARNA3-201ENST00000517097 143 ntBASIC3.56□□□□□ -1.84
RC3H1Q5TC82 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.56□□□□□ -1.84
RC3H1Q5TC82 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.56□□□□□ -1.84
RC3H1Q5TC82 RNU6-616P-201ENST00000384353 107 ntBASIC3.55□□□□□ -1.84
RC3H1Q5TC82 U8.15-201ENST00000390947 134 ntBASIC3.55□□□□□ -1.84
RC3H1Q5TC82 RNU7-96P-201ENST00000459535 64 ntBASIC3.55□□□□□ -1.84
RC3H1Q5TC82 RN7SL633P-201ENST00000488974 297 ntBASIC3.55□□□□□ -1.84
RC3H1Q5TC82 SCARNA11.3-201ENST00000517276 130 ntBASIC3.55□□□□□ -1.84
RC3H1Q5TC82 CTSLP2-204ENST00000629029 392 ntBASIC3.55□□□□□ -1.84
RC3H1Q5TC82 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RC3H1Q5TC82 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.55□□□□□ -1.84
RC3H1Q5TC82 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
RC3H1Q5TC82 AC092881.1-201ENST00000638218 2733 ntBASIC3.54□□□□□ -1.84
RC3H1Q5TC82 Y_RNA.430-201ENST00000384081 110 ntBASIC3.54□□□□□ -1.84
RC3H1Q5TC82 SNORD77B-201ENST00000391112 67 ntBASIC3.54□□□□□ -1.84
RC3H1Q5TC82 MIR887-201ENST00000401258 79 ntBASIC3.54□□□□□ -1.84
RC3H1Q5TC82 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.54□□□□□ -1.84
RC3H1Q5TC82 MICF-203ENST00000432679 129 ntBASIC3.54□□□□□ -1.84
RC3H1Q5TC82 RNU7-113P-201ENST00000459273 62 ntBASIC3.54□□□□□ -1.84
RC3H1Q5TC82 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.54□□□□□ -1.84
RC3H1Q5TC82 ZNF861P-201ENST00000588126 639 ntBASIC3.54□□□□□ -1.84
RC3H1Q5TC82 MIR5739-201ENST00000619803 80 ntBASIC3.54□□□□□ -1.84
RC3H1Q5TC82 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RC3H1Q5TC82 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RC3H1Q5TC82 Y_RNA.94-201ENST00000363068 106 ntBASIC3.53□□□□□ -1.84
RC3H1Q5TC82 Y_RNA.241-201ENST00000364470 117 ntBASIC3.53□□□□□ -1.84
RC3H1Q5TC82 MIR889-201ENST00000401280 79 ntBASIC3.53□□□□□ -1.84
RC3H1Q5TC82 RNU2-48P-201ENST00000410694 191 ntBASIC3.53□□□□□ -1.84
RC3H1Q5TC82 RNA5SP148-201ENST00000516527 94 ntBASIC3.53□□□□□ -1.84
RC3H1Q5TC82 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.53□□□□□ -1.84
RC3H1Q5TC82 AL512310.12-203ENST00000640543 90 ntBASIC3.53□□□□□ -1.84
RC3H1Q5TC82 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RC3H1Q5TC82 GABRG2-229ENST00000641017 3628 ntBASIC3.53□□□□□ -1.84
RC3H1Q5TC82 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RC3H1Q5TC82 RNU6-1313P-201ENST00000362622 102 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 SNORD115-2-201ENST00000362842 82 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 RNU1-23P-201ENST00000363361 144 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 Y_RNA.171-201ENST00000363760 102 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 SNORD115-20-201ENST00000365099 82 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 Y_RNA.316-201ENST00000365118 111 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 MIR218-1-201ENST00000384999 110 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 RNA5SP482-201ENST00000391269 118 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 AL163195.1-201ENST00000496941 348 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 RNU6-1006P-201ENST00000516998 103 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 AC024995.1-201ENST00000523014 93 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 UCA1.1-201ENST00000620952 75 ntBASIC3.52□□□□□ -1.85
RC3H1Q5TC82 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.52□□□□□ -1.85
RC3H1Q5TC82 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RC3H1Q5TC82 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RC3H1Q5TC82 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
RC3H1Q5TC82 MAPK10-322ENST00000641485 4530 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
RC3H1Q5TC82 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RC3H1Q5TC82 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RC3H1Q5TC82 RNU6-633P-201ENST00000362612 103 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 MIR515-2-201ENST00000384883 83 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 MIR515-1-201ENST00000384884 83 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 MIR95-201ENST00000385072 81 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.51□□□□□ -1.85
RC3H1Q5TC82 AC006539.3-201ENST00000454258 129 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 RN7SL442P-201ENST00000473804 320 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.51□□□□□ -1.85
RC3H1Q5TC82 RNA5SP24-201ENST00000516478 95 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 RNU6-1258P-201ENST00000516911 111 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 SNORD53-201ENST00000579969 78 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.51□□□□□ -1.85
RC3H1Q5TC82 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RC3H1Q5TC82 AL021368.2-201ENST00000606125 5352 ntBASIC3.51□□□□□ -1.85
RC3H1Q5TC82 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.5□□□□□ -1.85
RC3H1Q5TC82 SNORD56.3-201ENST00000363507 71 ntBASIC3.5□□□□□ -1.85
RC3H1Q5TC82 RNU6-805P-201ENST00000365643 106 ntBASIC3.5□□□□□ -1.85
RC3H1Q5TC82 Y_RNA.494-201ENST00000384432 111 ntBASIC3.5□□□□□ -1.85
RC3H1Q5TC82 RNU6-1328P-201ENST00000410938 106 ntBASIC3.5□□□□□ -1.85
RC3H1Q5TC82 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.5□□□□□ -1.85
RC3H1Q5TC82 AC069257.2-201ENST00000441819 155 ntBASIC3.5□□□□□ -1.85
RC3H1Q5TC82 AC008413.1-201ENST00000511864 177 ntBASIC3.5□□□□□ -1.85
RC3H1Q5TC82 RNU6-237P-201ENST00000515985 71 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms