Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 MIR4709-201ENST00000577272 72 ntBASIC3.28□□□□□ -1.88
CLK2P49760 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
CLK2P49760 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.28□□□□□ -1.88
CLK2P49760 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLK2P49760 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLK2P49760 SNORA80A-201ENST00000363922 136 ntBASIC3.27□□□□□ -1.89
CLK2P49760 RNU4-36P-201ENST00000364294 144 ntBASIC3.27□□□□□ -1.89
CLK2P49760 Y_RNA.299-201ENST00000364973 94 ntBASIC3.27□□□□□ -1.89
CLK2P49760 HMGN2P39-201ENST00000398005 273 ntBASIC3.27□□□□□ -1.89
CLK2P49760 RPS29P6-201ENST00000438196 145 ntBASIC3.27□□□□□ -1.89
CLK2P49760 SCARNA16.3-201ENST00000516595 184 ntBASIC3.27□□□□□ -1.89
CLK2P49760 RNA5SP481-201ENST00000516814 122 ntBASIC3.27□□□□□ -1.89
CLK2P49760 MIR3152-201ENST00000579801 74 ntBASIC3.27□□□□□ -1.89
CLK2P49760 MIR4658-201ENST00000584344 65 ntBASIC3.27□□□□□ -1.89
CLK2P49760 AC006023.1-201ENST00000603944 259 ntBASIC3.27□□□□□ -1.89
CLK2P49760 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CLK2P49760 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLK2P49760 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLK2P49760 AC093908.1-201ENST00000623125 8092 ntBASIC3.26□□□□□ -1.89
CLK2P49760 SNORD73B-201ENST00000364394 72 ntBASIC3.26□□□□□ -1.89
CLK2P49760 RNU6-49P-201ENST00000384256 107 ntBASIC3.26□□□□□ -1.89
CLK2P49760 POLR2J4-204ENST00000418424 324 ntBASIC3.26□□□□□ -1.89
CLK2P49760 AC022018.1-201ENST00000430685 241 ntBASIC3.26□□□□□ -1.89
CLK2P49760 AC093850.1-201ENST00000454121 251 ntBASIC3.26□□□□□ -1.89
CLK2P49760 RNU7-67P-201ENST00000459003 62 ntBASIC3.26□□□□□ -1.89
CLK2P49760 RPPH1-2P-201ENST00000516688 293 ntBASIC3.26□□□□□ -1.89
CLK2P49760 RNA5SP437-201ENST00000517249 129 ntBASIC3.26□□□□□ -1.89
CLK2P49760 SUB1P4-201ENST00000566062 339 ntBASIC3.26□□□□□ -1.89
CLK2P49760 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.26□□□□□ -1.89
CLK2P49760 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.26□□□□□ -1.89
CLK2P49760 AC087741.2-201ENST00000619415 172 ntBASIC3.26□□□□□ -1.89
CLK2P49760 AL513423.1-201ENST00000621695 132 ntBASIC3.26□□□□□ -1.89
CLK2P49760 AL137790.1-201ENST00000634283 177 ntBASIC3.26□□□□□ -1.89
CLK2P49760 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLK2P49760 AC108206.1-201ENST00000570186 4159 ntBASIC3.26□□□□□ -1.89
CLK2P49760 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLK2P49760 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLK2P49760 SNORD115-19-201ENST00000363098 82 ntBASIC3.25□□□□□ -1.89
CLK2P49760 SNORD115-18-201ENST00000363293 82 ntBASIC3.25□□□□□ -1.89
CLK2P49760 Y_RNA.220-201ENST00000364244 109 ntBASIC3.25□□□□□ -1.89
CLK2P49760 SNORD115-17-201ENST00000364612 82 ntBASIC3.25□□□□□ -1.89
CLK2P49760 RNU6-1319P-201ENST00000390855 104 ntBASIC3.25□□□□□ -1.89
CLK2P49760 RNU6-747P-201ENST00000390928 104 ntBASIC3.25□□□□□ -1.89
CLK2P49760 RNU6-241P-201ENST00000391148 104 ntBASIC3.25□□□□□ -1.89
CLK2P49760 RNU6-177P-201ENST00000411257 104 ntBASIC3.25□□□□□ -1.89
CLK2P49760 RN7SKP192-201ENST00000411291 327 ntBASIC3.25□□□□□ -1.89
CLK2P49760 MTATP8P2-201ENST00000435212 202 ntBASIC3.25□□□□□ -1.89
CLK2P49760 RNU7-113P-201ENST00000459273 62 ntBASIC3.25□□□□□ -1.89
CLK2P49760 snoU13.27-201ENST00000459278 104 ntBASIC3.25□□□□□ -1.89
CLK2P49760 AC113410.1-201ENST00000505029 247 ntBASIC3.25□□□□□ -1.89
CLK2P49760 DEFB131E-201ENST00000532329 154 ntBASIC3.25□□□□□ -1.89
CLK2P49760 AC079600.2-201ENST00000550076 130 ntBASIC3.25□□□□□ -1.89
CLK2P49760 FAM71BP1-201ENST00000604431 523 ntBASIC3.25□□□□□ -1.89
CLK2P49760 AC021506.2-201ENST00000612354 169 ntBASIC3.25□□□□□ -1.89
CLK2P49760 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CLK2P49760 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLK2P49760 Y_RNA.93-201ENST00000363066 109 ntBASIC3.24□□□□□ -1.89
CLK2P49760 Y_RNA.107-201ENST00000363190 121 ntBASIC3.24□□□□□ -1.89
CLK2P49760 RNU6-112P-201ENST00000363599 104 ntBASIC3.24□□□□□ -1.89
CLK2P49760 RNU6-525P-201ENST00000363685 104 ntBASIC3.24□□□□□ -1.89
CLK2P49760 RNA5SP261-201ENST00000410536 106 ntBASIC3.24□□□□□ -1.89
CLK2P49760 RPS29P29-201ENST00000456396 171 ntBASIC3.24□□□□□ -1.89
CLK2P49760 RNU7-45P-201ENST00000459460 63 ntBASIC3.24□□□□□ -1.89
CLK2P49760 AP004217.1-201ENST00000480579 346 ntBASIC3.24□□□□□ -1.89
CLK2P49760 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLK2P49760 MIR3618-201ENST00000580330 88 ntBASIC3.24□□□□□ -1.89
CLK2P49760 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.24□□□□□ -1.89
CLK2P49760 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.24□□□□□ -1.89
CLK2P49760 AC095038.3-201ENST00000634439 195 ntBASIC3.24□□□□□ -1.89
CLK2P49760 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLK2P49760 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CLK2P49760 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CLK2P49760 MIR488-201ENST00000365739 83 ntBASIC3.23□□□□□ -1.89
CLK2P49760 MIR660-201ENST00000385235 97 ntBASIC3.23□□□□□ -1.89
CLK2P49760 RNA5SP501-201ENST00000410990 112 ntBASIC3.23□□□□□ -1.89
CLK2P49760 RN7SKP132-201ENST00000516001 208 ntBASIC3.23□□□□□ -1.89
CLK2P49760 RNU6-958P-201ENST00000516995 106 ntBASIC3.23□□□□□ -1.89
CLK2P49760 AL513534.2-201ENST00000603836 250 ntBASIC3.23□□□□□ -1.89
CLK2P49760 AC006386.2-201ENST00000624491 75 ntBASIC3.23□□□□□ -1.89
CLK2P49760 AC012005.1-201ENST00000624575 75 ntBASIC3.23□□□□□ -1.89
CLK2P49760 MIR203B-201ENST00000636080 86 ntBASIC3.23□□□□□ -1.89
CLK2P49760 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLK2P49760 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CLK2P49760 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CLK2P49760 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CLK2P49760 MIR512-1-201ENST00000384913 84 ntBASIC3.22□□□□□ -1.89
CLK2P49760 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.22□□□□□ -1.89
CLK2P49760 RNU4-69P-201ENST00000410677 143 ntBASIC3.22□□□□□ -1.89
CLK2P49760 RNA5SP270-201ENST00000411361 118 ntBASIC3.22□□□□□ -1.89
CLK2P49760 COTL1P1-201ENST00000422309 375 ntBASIC3.22□□□□□ -1.89
CLK2P49760 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.22□□□□□ -1.89
CLK2P49760 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLK2P49760 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLK2P49760 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLK2P49760 RNY3P2-201ENST00000362918 102 ntBASIC3.21□□□□□ -1.9
CLK2P49760 Y_RNA.155-201ENST00000363632 101 ntBASIC3.21□□□□□ -1.9
CLK2P49760 RNU6-296P-201ENST00000384608 107 ntBASIC3.21□□□□□ -1.9
CLK2P49760 PGBD4P5-201ENST00000445958 426 ntBASIC3.21□□□□□ -1.9
CLK2P49760 RNA5SP367-201ENST00000516557 118 ntBASIC3.21□□□□□ -1.9
CLK2P49760 DNAJC19P9-201ENST00000555084 351 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms