Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL035425.3-201ENST00000564206 4996 ntBASIC3.33□□□□□ -1.88
VARSP26640 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VARSP26640 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.33□□□□□ -1.88
VARSP26640 MIRLET7C-201ENST00000362160 84 ntBASIC3.33□□□□□ -1.88
VARSP26640 MIR627-201ENST00000384979 97 ntBASIC3.33□□□□□ -1.88
VARSP26640 MIR1262-201ENST00000408276 93 ntBASIC3.33□□□□□ -1.88
VARSP26640 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.33□□□□□ -1.88
VARSP26640 BX510359.1-201ENST00000456973 237 ntBASIC3.33□□□□□ -1.88
VARSP26640 AC139453.2-201ENST00000487255 133 ntBASIC3.33□□□□□ -1.88
VARSP26640 RPPH1-2P-201ENST00000516688 293 ntBASIC3.33□□□□□ -1.88
VARSP26640 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
VARSP26640 MIR8054-201ENST00000620877 86 ntBASIC3.33□□□□□ -1.88
VARSP26640 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VARSP26640 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VARSP26640 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
VARSP26640 RNA5SP493-201ENST00000364115 91 ntBASIC3.32□□□□□ -1.88
VARSP26640 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.32□□□□□ -1.88
VARSP26640 AC104027.1-201ENST00000521887 300 ntBASIC3.32□□□□□ -1.88
VARSP26640 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.32□□□□□ -1.88
VARSP26640 MIR4298-201ENST00000584380 73 ntBASIC3.32□□□□□ -1.88
VARSP26640 AC027279.3-201ENST00000625055 122 ntBASIC3.32□□□□□ -1.88
VARSP26640 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VARSP26640 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
VARSP26640 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VARSP26640 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VARSP26640 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VARSP26640 RNU4-35P-201ENST00000362588 141 ntBASIC3.31□□□□□ -1.88
VARSP26640 RNU6-509P-201ENST00000363519 107 ntBASIC3.31□□□□□ -1.88
VARSP26640 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VARSP26640 SNORA32-201ENST00000384072 121 ntBASIC3.31□□□□□ -1.88
VARSP26640 Y_RNA.430-201ENST00000384081 110 ntBASIC3.31□□□□□ -1.88
VARSP26640 SNORD17-201ENST00000390930 237 ntBASIC3.31□□□□□ -1.88
VARSP26640 RN7SKP123-201ENST00000410732 291 ntBASIC3.31□□□□□ -1.88
VARSP26640 RNU7-34P-201ENST00000459394 64 ntBASIC3.31□□□□□ -1.88
VARSP26640 AL049873.1-201ENST00000480540 376 ntBASIC3.31□□□□□ -1.88
VARSP26640 RNU6-958P-201ENST00000516995 106 ntBASIC3.31□□□□□ -1.88
VARSP26640 MIR4506-201ENST00000584693 77 ntBASIC3.31□□□□□ -1.88
VARSP26640 RNU6-86P-201ENST00000606534 107 ntBASIC3.31□□□□□ -1.88
VARSP26640 SNORA28-201ENST00000606769 126 ntBASIC3.31□□□□□ -1.88
VARSP26640 AC103810.7-201ENST00000607821 91 ntBASIC3.31□□□□□ -1.88
VARSP26640 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.31□□□□□ -1.88
VARSP26640 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.31□□□□□ -1.88
VARSP26640 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.3□□□□□ -1.88
VARSP26640 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VARSP26640 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
VARSP26640 RNU6-220P-201ENST00000390919 107 ntBASIC3.3□□□□□ -1.88
VARSP26640 RN7SKP111-201ENST00000410349 271 ntBASIC3.3□□□□□ -1.88
VARSP26640 Y_RNA.607-201ENST00000410597 98 ntBASIC3.3□□□□□ -1.88
VARSP26640 RPL32P35-201ENST00000415214 394 ntBASIC3.3□□□□□ -1.88
VARSP26640 SNORA64.4-201ENST00000516632 81 ntBASIC3.3□□□□□ -1.88
VARSP26640 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.3□□□□□ -1.88
VARSP26640 MIR8057-201ENST00000620957 69 ntBASIC3.3□□□□□ -1.88
VARSP26640 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.3□□□□□ -1.88
VARSP26640 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VARSP26640 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VARSP26640 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VARSP26640 Y_RNA.247-201ENST00000364500 92 ntBASIC3.29□□□□□ -1.88
VARSP26640 AC090844.1-201ENST00000422019 156 ntBASIC3.29□□□□□ -1.88
VARSP26640 AC003685.2-201ENST00000422795 395 ntBASIC3.29□□□□□ -1.88
VARSP26640 AC005326.1-201ENST00000429197 123 ntBASIC3.29□□□□□ -1.88
VARSP26640 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
VARSP26640 RNU7-67P-201ENST00000459003 62 ntBASIC3.29□□□□□ -1.88
VARSP26640 IGKV2-26-201ENST00000518305 343 ntBASIC3.29□□□□□ -1.88
VARSP26640 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.29□□□□□ -1.88
VARSP26640 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.29□□□□□ -1.88
VARSP26640 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.29□□□□□ -1.88
VARSP26640 MIR6841-201ENST00000637129 72 ntBASIC3.29□□□□□ -1.88
VARSP26640 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
VARSP26640 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VARSP26640 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
VARSP26640 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VARSP26640 RNU6-461P-201ENST00000364195 107 ntBASIC3.28□□□□□ -1.88
VARSP26640 MIR889-201ENST00000401280 79 ntBASIC3.28□□□□□ -1.88
VARSP26640 RPS12P2-201ENST00000439728 269 ntBASIC3.28□□□□□ -1.88
VARSP26640 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.28□□□□□ -1.88
VARSP26640 RNU6-56P-201ENST00000516986 93 ntBASIC3.28□□□□□ -1.88
VARSP26640 AC245166.1-201ENST00000521012 253 ntBASIC3.28□□□□□ -1.88
VARSP26640 AL356274.2-201ENST00000624379 3752 ntBASIC3.28□□□□□ -1.88
VARSP26640 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
VARSP26640 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.27□□□□□ -1.89
VARSP26640 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
VARSP26640 RNU6-23P-201ENST00000363283 107 ntBASIC3.27□□□□□ -1.89
VARSP26640 SNORA1.2-201ENST00000365189 134 ntBASIC3.27□□□□□ -1.89
VARSP26640 Y_RNA.370-201ENST00000365589 108 ntBASIC3.27□□□□□ -1.89
VARSP26640 SNORA70.7-201ENST00000384159 133 ntBASIC3.27□□□□□ -1.89
VARSP26640 SNORA11.4-201ENST00000408823 129 ntBASIC3.27□□□□□ -1.89
VARSP26640 Y_RNA.609-201ENST00000410669 89 ntBASIC3.27□□□□□ -1.89
VARSP26640 AC104332.2-201ENST00000429959 156 ntBASIC3.27□□□□□ -1.89
VARSP26640 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.27□□□□□ -1.89
VARSP26640 UBBP3-201ENST00000445497 241 ntBASIC3.27□□□□□ -1.89
VARSP26640 UBL5P1-201ENST00000507979 193 ntBASIC3.27□□□□□ -1.89
VARSP26640 SNORA31.26-201ENST00000517250 137 ntBASIC3.27□□□□□ -1.89
VARSP26640 MIR3169-201ENST00000578032 83 ntBASIC3.27□□□□□ -1.89
VARSP26640 AL449363.1-201ENST00000617815 186 ntBASIC3.27□□□□□ -1.89
VARSP26640 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
VARSP26640 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
VARSP26640 RNU6-633P-201ENST00000362612 103 ntBASIC3.26□□□□□ -1.89
VARSP26640 Y_RNA.500-201ENST00000384466 111 ntBASIC3.26□□□□□ -1.89
VARSP26640 MIR490-201ENST00000384865 128 ntBASIC3.26□□□□□ -1.89
VARSP26640 MIR516B2-201ENST00000385190 85 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 242.6 ms