Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 HMGN2P39-201ENST00000398005 273 ntBASIC2.09□□□□□ -2.07
SCAF4O95104 MIR1261-201ENST00000408659 82 ntBASIC2.09□□□□□ -2.07
SCAF4O95104 AC105272.1-201ENST00000438604 198 ntBASIC2.09□□□□□ -2.07
SCAF4O95104 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.09□□□□□ -2.07
SCAF4O95104 AC114811.1-201ENST00000507207 168 ntBASIC2.09□□□□□ -2.07
SCAF4O95104 PDCD5P2-201ENST00000507570 312 ntBASIC2.09□□□□□ -2.07
SCAF4O95104 SNORD36C-201ENST00000516733 66 ntBASIC2.09□□□□□ -2.07
SCAF4O95104 GTF3AP2-201ENST00000557014 266 ntBASIC2.09□□□□□ -2.07
SCAF4O95104 AC007336.1-201ENST00000576365 3828 ntBASIC2.09□□□□□ -2.07
SCAF4O95104 AL033523.1-201ENST00000605153 153 ntBASIC2.09□□□□□ -2.07
SCAF4O95104 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SCAF4O95104 SNORD115-28-201ENST00000363931 81 ntBASIC2.08□□□□□ -2.08
SCAF4O95104 SNORD114-30-201ENST00000364448 72 ntBASIC2.08□□□□□ -2.08
SCAF4O95104 SNORA4.2-201ENST00000365313 147 ntBASIC2.08□□□□□ -2.08
SCAF4O95104 AL138827.1-201ENST00000402666 306 ntBASIC2.08□□□□□ -2.08
SCAF4O95104 RNA5SP282-201ENST00000516355 108 ntBASIC2.08□□□□□ -2.08
SCAF4O95104 ELOCP29-201ENST00000588193 334 ntBASIC2.08□□□□□ -2.08
SCAF4O95104 AL670379.3-201ENST00000605040 251 ntBASIC2.08□□□□□ -2.08
SCAF4O95104 AC025166.1-201ENST00000612411 163 ntBASIC2.08□□□□□ -2.08
SCAF4O95104 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.08□□□□□ -2.08
SCAF4O95104 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SCAF4O95104 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.07□□□□□ -2.08
SCAF4O95104 RNU6-755P-201ENST00000364400 103 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 AC063976.4-201ENST00000421971 163 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 CALM2P4-201ENST00000430810 426 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.07□□□□□ -2.08
SCAF4O95104 RN7SKP132-201ENST00000516001 208 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 RNU6-113P-201ENST00000516653 101 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 MIR4435-1-201ENST00000582552 80 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 AC002984.1-201ENST00000591692 448 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 AL627230.6-201ENST00000611129 280 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.07□□□□□ -2.08
SCAF4O95104 MTND5P18-201ENST00000445624 1801 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SCAF4O95104 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
SCAF4O95104 MIRLET7G-201ENST00000362280 84 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 Y_RNA.35-201ENST00000362601 101 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 RNU1-112P-201ENST00000364401 164 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 Y_RNA.366-201ENST00000365540 102 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 RNU6-1189P-201ENST00000383958 107 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 Y_RNA.440-201ENST00000384120 114 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SCAF4O95104 SNORA48.1-201ENST00000390879 135 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 RNA5SP465-201ENST00000391195 109 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 RPS26P48-201ENST00000491713 339 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 AC079600.2-201ENST00000550076 130 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 SUB1P4-201ENST00000566062 339 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 AC027279.3-201ENST00000625055 122 ntBASIC2.06□□□□□ -2.08
SCAF4O95104 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCAF4O95104 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
SCAF4O95104 AC005336.3-201ENST00000623833 2679 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SCAF4O95104 Y_RNA.346-201ENST00000365385 112 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 SNORA2.2-201ENST00000365473 135 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 SNORD116-21-201ENST00000384507 92 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 MIR548A3-201ENST00000385297 97 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 U8.16-201ENST00000391279 133 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 AC069257.2-201ENST00000441819 155 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 HMGN2P32-201ENST00000444648 269 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 CYCTP-201ENST00000504253 315 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 RNA5SP437-201ENST00000517249 129 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.05□□□□□ -2.08
SCAF4O95104 SNORA28-201ENST00000606769 126 ntBASIC2.05□□□□□ -2.08
SCAF4O95104 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SCAF4O95104 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SCAF4O95104 RNU6-349P-201ENST00000362402 107 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 RNA5SP456-201ENST00000364002 114 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 RNU6-424P-201ENST00000384367 105 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 RNU6-296P-201ENST00000384608 107 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 MIR196B-201ENST00000384852 84 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 MIR1263-201ENST00000408324 86 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 RNA5SP501-201ENST00000410990 112 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 AL513328.1-201ENST00000446460 224 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 SNORD109B-201ENST00000458961 67 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 SNORD109A-201ENST00000459128 67 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 RNA5SP356-201ENST00000515972 94 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 SCARNA16.3-201ENST00000516595 184 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 MIR4319-201ENST00000577285 85 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 AL137067.1-201ENST00000615933 120 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 AC015726.2-201ENST00000620112 122 ntBASIC2.04□□□□□ -2.08
SCAF4O95104 ZNF720P1-201ENST00000562403 1939 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 SNORA22-201ENST00000383907 134 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 RNU6-163P-201ENST00000384396 106 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 RNU6-1031P-201ENST00000384773 107 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 MIR548A1-201ENST00000385041 97 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SCAF4O95104 RN7SKP200-201ENST00000410564 320 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 Y_RNA.649-201ENST00000459077 103 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 RNU6-240P-201ENST00000516098 97 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 RNU6-830P-201ENST00000516353 107 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 RNA5SP168-201ENST00000516642 112 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 AP003484.1-201ENST00000530974 250 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 AL121890.5-201ENST00000620848 304 ntBASIC2.03□□□□□ -2.08
SCAF4O95104 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms