Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 RNU6-554P-201ENST00000410466 106 ntBASIC2.2□□□□□ -2.06
PACSIN3Q9UKS6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.2□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.2□□□□□ -2.06
PACSIN3Q9UKS6 RNA5SP24-201ENST00000516478 95 ntBASIC2.2□□□□□ -2.06
PACSIN3Q9UKS6 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
PACSIN3Q9UKS6 MIR3945-201ENST00000581853 98 ntBASIC2.2□□□□□ -2.06
PACSIN3Q9UKS6 AL359075.3-201ENST00000613288 217 ntBASIC2.2□□□□□ -2.06
PACSIN3Q9UKS6 AC064859.1-201ENST00000624741 174 ntBASIC2.2□□□□□ -2.06
PACSIN3Q9UKS6 MIR1291-201ENST00000627649 87 ntBASIC2.2□□□□□ -2.06
PACSIN3Q9UKS6 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
PACSIN3Q9UKS6 RNA5SP125-201ENST00000364843 120 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 SNORD24-201ENST00000383884 75 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 MIR522-201ENST00000385071 87 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 AL359511.1-201ENST00000402970 211 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 RNY4P30-201ENST00000410216 95 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 RN7SKP284-201ENST00000411002 343 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 AC007064.1-201ENST00000412238 351 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 SNRPGP13-201ENST00000442212 177 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-341P-201ENST00000516973 96 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 AC007012.1-201ENST00000567192 175 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 AL137067.1-201ENST00000615933 120 ntBASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PACSIN3Q9UKS6 AC016717.2-201ENST00000609089 5141 ntBASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 SNORA1B-201ENST00000362535 133 ntBASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-32P-201ENST00000383948 107 ntBASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-13P-201ENST00000384248 107 ntBASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-12P-201ENST00000384604 107 ntBASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-41P-201ENST00000384741 107 ntBASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 RN7SL636P-201ENST00000497504 294 ntBASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 AC234781.5-201ENST00000508429 271 ntBASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 RNU1-142P-201ENST00000516682 145 ntBASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 AC046143.2-201ENST00000609789 160 ntBASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PACSIN3Q9UKS6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 Y_RNA.281-201ENST00000364774 94 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-1107P-201ENST00000364817 104 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 SNORA70B-201ENST00000384210 135 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-443P-201ENST00000384780 107 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 MIR144-201ENST00000384886 86 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 MIR561-201ENST00000385216 97 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 RNU2-63P-201ENST00000410792 194 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 RNU4-53P-201ENST00000410828 140 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 FTH1P12-201ENST00000432137 551 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 AL049830.1-201ENST00000468034 425 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-240P-201ENST00000516098 97 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 Y_RNA.677-201ENST00000516401 85 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 Y_RNA.694-201ENST00000516677 117 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 RNA5SP82-201ENST00000516707 92 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 AC103810.6-201ENST00000606708 136 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 MIR6766-201ENST00000622641 72 ntBASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.17□□□□□ -2.06
PACSIN3Q9UKS6 SNORD68-201ENST00000363214 84 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 SNORA25B-201ENST00000365507 128 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 SNORD12C-201ENST00000386307 89 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 MIR1262-201ENST00000408276 93 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 AL353689.1-201ENST00000438895 199 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 RPS29P24-201ENST00000486345 171 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 AL163195.1-201ENST00000496941 348 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 SNORA72.7-201ENST00000516349 94 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 RNU6-537P-201ENST00000517277 103 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 AC009831.4-201ENST00000620744 325 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 AL035470.1-201ENST00000622571 220 ntBASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.16□□□□□ -2.06
PACSIN3Q9UKS6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PACSIN3Q9UKS6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
PACSIN3Q9UKS6 RNA5SP289-201ENST00000362332 137 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 Y_RNA.85-201ENST00000363014 111 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 SNORA8-201ENST00000384574 139 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 MIR570-201ENST00000384917 97 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 RNA5SP323-201ENST00000391094 133 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 MIR548O-201ENST00000408583 114 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 RNA5SP136-201ENST00000410906 107 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 HMGN2P32-201ENST00000444648 269 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 MIR5197-201ENST00000583721 112 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 AC106754.2-201ENST00000623006 233 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 ICE2P2-201ENST00000483823 2787 ntBASIC2.15□□□□□ -2.07
PACSIN3Q9UKS6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PACSIN3Q9UKS6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PACSIN3Q9UKS6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PACSIN3Q9UKS6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
PACSIN3Q9UKS6 RNU6-862P-201ENST00000362804 105 ntBASIC2.14□□□□□ -2.07
PACSIN3Q9UKS6 SNORA63.5-201ENST00000363548 123 ntBASIC2.14□□□□□ -2.07
PACSIN3Q9UKS6 SNORA67.1-201ENST00000364749 141 ntBASIC2.14□□□□□ -2.07
PACSIN3Q9UKS6 RNU6-905P-201ENST00000384434 107 ntBASIC2.14□□□□□ -2.07
PACSIN3Q9UKS6 MT-TI-201ENST00000387365 69 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms