Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 MIR4305-201ENST00000583252 102 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM41Q8WV44 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 MIR6779-201ENST00000617283 64 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM41Q8WV44 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM41Q8WV44 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRIM41Q8WV44 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM41Q8WV44 RNY3P2-201ENST00000362918 102 ntBASIC4.82□□□□□ -1.64
TRIM41Q8WV44 RNU4-16P-201ENST00000364737 141 ntBASIC4.82□□□□□ -1.64
TRIM41Q8WV44 Y_RNA.351-201ENST00000365436 96 ntBASIC4.82□□□□□ -1.64
TRIM41Q8WV44 AC009238.1-201ENST00000442165 424 ntBASIC4.82□□□□□ -1.64
TRIM41Q8WV44 AC009237.6-201ENST00000446969 424 ntBASIC4.82□□□□□ -1.64
TRIM41Q8WV44 CYP2C59P-201ENST00000457790 269 ntBASIC4.82□□□□□ -1.64
TRIM41Q8WV44 AP002004.2-201ENST00000531656 154 ntBASIC4.82□□□□□ -1.64
TRIM41Q8WV44 MIR7157-201ENST00000635801 60 ntBASIC4.82□□□□□ -1.64
TRIM41Q8WV44 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM41Q8WV44 MAPK10-266ENST00000641066 6555 ntBASIC4.81□□□□□ -1.64
TRIM41Q8WV44 Y_RNA.547-201ENST00000384654 119 ntBASIC4.81□□□□□ -1.64
TRIM41Q8WV44 SNORD78.1-201ENST00000390866 65 ntBASIC4.81□□□□□ -1.64
TRIM41Q8WV44 RPL21P3-201ENST00000395517 478 ntBASIC4.81□□□□□ -1.64
TRIM41Q8WV44 RNU4-53P-201ENST00000410828 140 ntBASIC4.81□□□□□ -1.64
TRIM41Q8WV44 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TRIM41Q8WV44 SNX2P2-201ENST00000424553 323 ntBASIC4.81□□□□□ -1.64
TRIM41Q8WV44 Y_RNA.685-201ENST00000516532 108 ntBASIC4.81□□□□□ -1.64
TRIM41Q8WV44 AC015726.2-201ENST00000620112 122 ntBASIC4.81□□□□□ -1.64
TRIM41Q8WV44 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM41Q8WV44 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TRIM41Q8WV44 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM41Q8WV44 RNY1P10-201ENST00000363268 113 ntBASIC4.8□□□□□ -1.64
TRIM41Q8WV44 POLR2J4-204ENST00000418424 324 ntBASIC4.8□□□□□ -1.64
TRIM41Q8WV44 AC006441.5-201ENST00000612680 209 ntBASIC4.8□□□□□ -1.64
TRIM41Q8WV44 MIR338-201ENST00000636369 67 ntBASIC4.8□□□□□ -1.64
TRIM41Q8WV44 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM41Q8WV44 AC093831.2-201ENST00000624393 3427 ntBASIC4.79□□□□□ -1.64
TRIM41Q8WV44 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM41Q8WV44 MAPK10-322ENST00000641485 4530 ntBASIC4.79□□□□□ -1.64
TRIM41Q8WV44 SNORA33-201ENST00000363664 130 ntBASIC4.79□□□□□ -1.64
TRIM41Q8WV44 MIR1912-201ENST00000410389 80 ntBASIC4.79□□□□□ -1.64
TRIM41Q8WV44 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM41Q8WV44 SCARNA23-201ENST00000516060 130 ntBASIC4.79□□□□□ -1.64
TRIM41Q8WV44 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM41Q8WV44 RNU6-268P-201ENST00000364174 107 ntBASIC4.78□□□□□ -1.64
TRIM41Q8WV44 Y_RNA.219-201ENST00000364232 113 ntBASIC4.78□□□□□ -1.64
TRIM41Q8WV44 snoU2-30.1-201ENST00000365012 70 ntBASIC4.78□□□□□ -1.64
TRIM41Q8WV44 Y_RNA.440-201ENST00000384120 114 ntBASIC4.78□□□□□ -1.64
TRIM41Q8WV44 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM41Q8WV44 HSPE1P19-201ENST00000603327 295 ntBASIC4.78□□□□□ -1.64
TRIM41Q8WV44 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM41Q8WV44 FAM35CP-201ENST00000554755 2470 ntBASIC4.78□□□□□ -1.64
TRIM41Q8WV44 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM41Q8WV44 RNU6-1152P-201ENST00000384576 107 ntBASIC4.77□□□□□ -1.65
TRIM41Q8WV44 RNU6-893P-201ENST00000458841 100 ntBASIC4.77□□□□□ -1.65
TRIM41Q8WV44 RN7SL330P-201ENST00000469709 307 ntBASIC4.77□□□□□ -1.65
TRIM41Q8WV44 AP003484.1-201ENST00000530974 250 ntBASIC4.77□□□□□ -1.65
TRIM41Q8WV44 MIR4778-201ENST00000577635 80 ntBASIC4.77□□□□□ -1.65
TRIM41Q8WV44 U6.108-201ENST00000637764 58 ntBASIC4.77□□□□□ -1.65
TRIM41Q8WV44 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM41Q8WV44 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM41Q8WV44 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM41Q8WV44 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
TRIM41Q8WV44 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM41Q8WV44 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.76□□□□□ -1.65
TRIM41Q8WV44 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.76□□□□□ -1.65
TRIM41Q8WV44 RNU7-80P-201ENST00000459562 61 ntBASIC4.76□□□□□ -1.65
TRIM41Q8WV44 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM41Q8WV44 RNU2-35P-201ENST00000516446 142 ntBASIC4.76□□□□□ -1.65
TRIM41Q8WV44 RNA5SP380-201ENST00000517190 98 ntBASIC4.76□□□□□ -1.65
TRIM41Q8WV44 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM41Q8WV44 MIR4474-201ENST00000579189 78 ntBASIC4.76□□□□□ -1.65
TRIM41Q8WV44 AC012531.5-201ENST00000611375 151 ntBASIC4.76□□□□□ -1.65
TRIM41Q8WV44 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM41Q8WV44 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM41Q8WV44 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TRIM41Q8WV44 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
TRIM41Q8WV44 RNU1-112P-201ENST00000364401 164 ntBASIC4.75□□□□□ -1.65
TRIM41Q8WV44 Y_RNA.531-201ENST00000384589 121 ntBASIC4.75□□□□□ -1.65
TRIM41Q8WV44 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM41Q8WV44 AL513534.2-201ENST00000603836 250 ntBASIC4.75□□□□□ -1.65
TRIM41Q8WV44 AL355297.2-201ENST00000604792 129 ntBASIC4.75□□□□□ -1.65
TRIM41Q8WV44 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.75□□□□□ -1.65
TRIM41Q8WV44 AC091932.4-201ENST00000623386 200 ntBASIC4.75□□□□□ -1.65
TRIM41Q8WV44 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM41Q8WV44 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM41Q8WV44 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM41Q8WV44 AC108206.1-201ENST00000570186 4159 ntBASIC4.74□□□□□ -1.65
TRIM41Q8WV44 Y_RNA.593-201ENST00000410292 98 ntBASIC4.74□□□□□ -1.65
TRIM41Q8WV44 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM41Q8WV44 RNU7-94P-201ENST00000459576 63 ntBASIC4.74□□□□□ -1.65
TRIM41Q8WV44 SNORD45.4-201ENST00000516629 73 ntBASIC4.74□□□□□ -1.65
TRIM41Q8WV44 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM41Q8WV44 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM41Q8WV44 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM41Q8WV44 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM41Q8WV44 Y_RNA.17-201ENST00000362433 111 ntBASIC4.73□□□□□ -1.65
TRIM41Q8WV44 RNA5SP139-201ENST00000364340 117 ntBASIC4.73□□□□□ -1.65
TRIM41Q8WV44 RNU2-63P-201ENST00000410792 194 ntBASIC4.73□□□□□ -1.65
TRIM41Q8WV44 RNU6-667P-201ENST00000517186 102 ntBASIC4.73□□□□□ -1.65
TRIM41Q8WV44 FAM71BP1-201ENST00000604431 523 ntBASIC4.73□□□□□ -1.65
TRIM41Q8WV44 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms