Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 UBE2DNL-203ENST00000474922 222 ntBASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 Y_RNA.94-201ENST00000363068 106 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 RNU1-105P-201ENST00000363470 161 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 SNORD114-6-201ENST00000364393 72 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 SNORA8-201ENST00000384574 139 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 RNU6-788P-201ENST00000390967 104 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 RNA5SP229-201ENST00000410809 99 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 RNU2-40P-201ENST00000410833 196 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 AL161788.1-201ENST00000441805 169 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 AL163195.1-201ENST00000496941 348 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 SNORA31.1-201ENST00000515993 133 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 SNORA31.5-201ENST00000516190 133 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 RNU6-1116P-201ENST00000517269 99 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 UCA1.1-201ENST00000620952 75 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 AC002546.1-201ENST00000588041 2504 ntBASIC3.24□□□□□ -1.89
FOXR1Q6PIV2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 MIR422A-201ENST00000362286 90 ntBASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 Y_RNA.377-201ENST00000365644 108 ntBASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 SNORA27-201ENST00000384323 126 ntBASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 RNU4-69P-201ENST00000410677 143 ntBASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 RPS29P6-201ENST00000438196 145 ntBASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 EIF4BP1-201ENST00000554881 351 ntBASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 AC103810.6-201ENST00000606708 136 ntBASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.23□□□□□ -1.89
FOXR1Q6PIV2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 Y_RNA.247-201ENST00000364500 92 ntBASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 SNORD58A-201ENST00000383875 65 ntBASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 Y_RNA.470-201ENST00000384307 117 ntBASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 U8.15-201ENST00000390947 134 ntBASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 RNA5SP323-201ENST00000391094 133 ntBASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 AL627390.1-201ENST00000396055 340 ntBASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 AL606517.2-201ENST00000442855 241 ntBASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 uc_338.1-201ENST00000612113 180 ntBASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 uc_338.25-201ENST00000613756 156 ntBASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.22□□□□□ -1.89
FOXR1Q6PIV2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
FOXR1Q6PIV2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 Y_RNA.241-201ENST00000364470 117 ntBASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 Y_RNA.336-201ENST00000365307 109 ntBASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 RNU11-5P-201ENST00000391216 129 ntBASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 AC006483.1-201ENST00000487308 313 ntBASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 RNU6-998P-201ENST00000515894 101 ntBASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 MIR4513-201ENST00000581077 86 ntBASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 MIR3199-1-201ENST00000582434 88 ntBASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 AL137790.1-201ENST00000634283 177 ntBASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXR1Q6PIV2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 RNU6-509P-201ENST00000363519 107 ntBASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 Y_RNA.316-201ENST00000365118 111 ntBASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 MIR5004-201ENST00000579078 107 ntBASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 MIR548AE2-201ENST00000583456 67 ntBASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 MIR376B-201ENST00000614515 100 ntBASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXR1Q6PIV2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 RNA5SP295-201ENST00000362655 121 ntBASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 AP000567.1-201ENST00000406413 156 ntBASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 AL135938.1-201ENST00000443141 297 ntBASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 RNU7-113P-201ENST00000459273 62 ntBASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 AC114811.1-201ENST00000507207 168 ntBASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 SCARNA3-201ENST00000517097 143 ntBASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 ZNF861P-201ENST00000588126 639 ntBASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 CTSLP2-204ENST00000629029 392 ntBASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 AL512310.12-203ENST00000640543 90 ntBASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
FOXR1Q6PIV2 Y_RNA.96-201ENST00000363092 109 ntBASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 FO393413.1-201ENST00000402892 195 ntBASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 RNU7-181P-201ENST00000517234 74 ntBASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 AC103810.7-201ENST00000607821 91 ntBASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 MIR7515-201ENST00000637837 67 ntBASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 AC005336.3-201ENST00000623833 2679 ntBASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
FOXR1Q6PIV2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 SNORA5B-201ENST00000363786 132 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 SNORD116-10-201ENST00000363791 102 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 SNORA25.6-201ENST00000364121 118 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms