Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
FOXC1Q12948 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXC1Q12948 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXC1Q12948 RNU6-865P-201ENST00000364772 107 ntBASIC3.33□□□□□ -1.88
FOXC1Q12948 RNU6-1321P-201ENST00000390905 107 ntBASIC3.33□□□□□ -1.88
FOXC1Q12948 FO393413.1-201ENST00000402892 195 ntBASIC3.33□□□□□ -1.88
FOXC1Q12948 MIR1261-201ENST00000408659 82 ntBASIC3.33□□□□□ -1.88
FOXC1Q12948 RNU2-59P-201ENST00000410482 191 ntBASIC3.33□□□□□ -1.88
FOXC1Q12948 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXC1Q12948 CST9LP2-201ENST00000437612 320 ntBASIC3.33□□□□□ -1.88
FOXC1Q12948 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXC1Q12948 RNU7-67P-201ENST00000459003 62 ntBASIC3.33□□□□□ -1.88
FOXC1Q12948 SEM1P1-201ENST00000506694 209 ntBASIC3.33□□□□□ -1.88
FOXC1Q12948 RNU6-448P-201ENST00000517052 107 ntBASIC3.33□□□□□ -1.88
FOXC1Q12948 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXC1Q12948 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXC1Q12948 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXC1Q12948 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXC1Q12948 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXC1Q12948 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXC1Q12948 AL035425.3-201ENST00000564206 4996 ntBASIC3.32□□□□□ -1.88
FOXC1Q12948 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXC1Q12948 RNU6-862P-201ENST00000362804 105 ntBASIC3.32□□□□□ -1.88
FOXC1Q12948 Y_RNA.168-201ENST00000363740 102 ntBASIC3.32□□□□□ -1.88
FOXC1Q12948 MIR218-1-201ENST00000384999 110 ntBASIC3.32□□□□□ -1.88
FOXC1Q12948 RNU6-1077P-201ENST00000410506 102 ntBASIC3.32□□□□□ -1.88
FOXC1Q12948 STAG3L5P-204ENST00000443759 179 ntBASIC3.32□□□□□ -1.88
FOXC1Q12948 CYP2C59P-201ENST00000457790 269 ntBASIC3.32□□□□□ -1.88
FOXC1Q12948 AC025445.1-201ENST00000502728 300 ntBASIC3.32□□□□□ -1.88
FOXC1Q12948 SNORD67.1-201ENST00000516618 108 ntBASIC3.32□□□□□ -1.88
FOXC1Q12948 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXC1Q12948 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.32□□□□□ -1.88
FOXC1Q12948 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXC1Q12948 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
FOXC1Q12948 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXC1Q12948 AC093010.3-201ENST00000570269 15214 ntBASIC3.31□□□□□ -1.88
FOXC1Q12948 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXC1Q12948 RNU6-833P-201ENST00000363486 107 ntBASIC3.31□□□□□ -1.88
FOXC1Q12948 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXC1Q12948 snoU13.11-201ENST00000459219 104 ntBASIC3.31□□□□□ -1.88
FOXC1Q12948 AC018868.1-201ENST00000491307 315 ntBASIC3.31□□□□□ -1.88
FOXC1Q12948 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXC1Q12948 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.31□□□□□ -1.88
FOXC1Q12948 MIR8054-201ENST00000620877 86 ntBASIC3.31□□□□□ -1.88
FOXC1Q12948 OTUD4P1-201ENST00000237841 3067 ntBASIC3.31□□□□□ -1.88
FOXC1Q12948 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXC1Q12948 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
FOXC1Q12948 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXC1Q12948 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
FOXC1Q12948 Y_RNA.99-201ENST00000363138 105 ntBASIC3.3□□□□□ -1.88
FOXC1Q12948 MIR93-201ENST00000385024 80 ntBASIC3.3□□□□□ -1.88
FOXC1Q12948 RNA5SP109-201ENST00000391010 116 ntBASIC3.3□□□□□ -1.88
FOXC1Q12948 RNU6-380P-201ENST00000410207 107 ntBASIC3.3□□□□□ -1.88
FOXC1Q12948 AC008163.1-202ENST00000636004 2889 ntBASIC3.3□□□□□ -1.88
FOXC1Q12948 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
FOXC1Q12948 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXC1Q12948 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.29□□□□□ -1.88
FOXC1Q12948 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
FOXC1Q12948 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
FOXC1Q12948 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 SNORD114-10-201ENST00000363409 72 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNA5SP138-201ENST00000365098 114 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 SNORD38.2-201ENST00000384470 69 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 MTND4LP19-201ENST00000403051 166 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-447P-201ENST00000410293 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-1118P-201ENST00000410382 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-1076P-201ENST00000410397 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-355P-201ENST00000410427 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-791P-201ENST00000410467 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-705P-201ENST00000410601 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-1100P-201ENST00000410691 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-860P-201ENST00000410860 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-1217P-201ENST00000411276 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-785P-201ENST00000411324 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 Y_RNA.660-201ENST00000516002 120 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU7-137P-201ENST00000516788 62 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 RNU6-667P-201ENST00000517186 102 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 IGLV3-26-201ENST00000520756 302 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 U6.90-201ENST00000614007 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 U6.70-201ENST00000620287 104 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 UCA1.1-201ENST00000620952 75 ntBASIC3.29□□□□□ -1.88
FOXC1Q12948 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.29□□□□□ -1.88
FOXC1Q12948 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
FOXC1Q12948 AC009487.2-201ENST00000420969 6821 ntBASIC3.28□□□□□ -1.88
FOXC1Q12948 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FOXC1Q12948 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
FOXC1Q12948 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
FOXC1Q12948 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
FOXC1Q12948 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FOXC1Q12948 RNU4-47P-201ENST00000410876 114 ntBASIC3.28□□□□□ -1.88
FOXC1Q12948 MIR3199-1-201ENST00000582434 88 ntBASIC3.28□□□□□ -1.88
FOXC1Q12948 SNORA28-201ENST00000606769 126 ntBASIC3.28□□□□□ -1.88
FOXC1Q12948 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
FOXC1Q12948 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.28□□□□□ -1.88
FOXC1Q12948 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
FOXC1Q12948 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
FOXC1Q12948 RNU6-649P-201ENST00000384463 107 ntBASIC3.27□□□□□ -1.89
FOXC1Q12948 MIR520H-201ENST00000385126 88 ntBASIC3.27□□□□□ -1.89
FOXC1Q12948 AC245047.7-201ENST00000440265 293 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms