Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 COTL1P1-201ENST00000422309 375 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 AC092427.1-202ENST00000430569 476 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 UBL5P3-201ENST00000475112 231 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 AC022137.1-201ENST00000483735 151 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 AC092185.1-201ENST00000491371 97 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 RNU6-162P-201ENST00000516228 103 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 AC026271.5-201ENST00000577873 130 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 AC069114.2-201ENST00000604699 304 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 RNVU1-4-201ENST00000612985 164 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 AC025521.1-201ENST00000621624 286 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXA2O43364 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXA2O43364 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXA2O43364 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXA2O43364 RNU6-1124P-201ENST00000384169 107 ntBASIC3.49□□□□□ -1.85
HOXA2O43364 RNU6-242P-201ENST00000384359 107 ntBASIC3.49□□□□□ -1.85
HOXA2O43364 MIR605-201ENST00000385078 83 ntBASIC3.49□□□□□ -1.85
HOXA2O43364 AL135938.1-201ENST00000443141 297 ntBASIC3.49□□□□□ -1.85
HOXA2O43364 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXA2O43364 SNORA31.4-201ENST00000516049 129 ntBASIC3.49□□□□□ -1.85
HOXA2O43364 RNU7-181P-201ENST00000517234 74 ntBASIC3.49□□□□□ -1.85
HOXA2O43364 EIF4BP1-201ENST00000554881 351 ntBASIC3.49□□□□□ -1.85
HOXA2O43364 AC005786.1-201ENST00000588553 154 ntBASIC3.49□□□□□ -1.85
HOXA2O43364 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXA2O43364 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXA2O43364 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXA2O43364 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXA2O43364 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXA2O43364 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXA2O43364 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXA2O43364 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXA2O43364 RNU1-70P-201ENST00000362618 164 ntBASIC3.48□□□□□ -1.85
HOXA2O43364 SNORA1.2-201ENST00000365189 134 ntBASIC3.48□□□□□ -1.85
HOXA2O43364 SNORA70.7-201ENST00000384159 133 ntBASIC3.48□□□□□ -1.85
HOXA2O43364 SNORA7.4-201ENST00000384249 137 ntBASIC3.48□□□□□ -1.85
HOXA2O43364 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXA2O43364 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXA2O43364 AC069257.2-201ENST00000441819 155 ntBASIC3.48□□□□□ -1.85
HOXA2O43364 RPPH1-2P-201ENST00000516688 293 ntBASIC3.48□□□□□ -1.85
HOXA2O43364 MIR3152-201ENST00000579801 74 ntBASIC3.48□□□□□ -1.85
HOXA2O43364 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXA2O43364 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HOXA2O43364 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXA2O43364 AL021368.2-201ENST00000606125 5352 ntBASIC3.48□□□□□ -1.85
HOXA2O43364 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXA2O43364 AL035425.3-201ENST00000564206 4996 ntBASIC3.47□□□□□ -1.85
HOXA2O43364 Y_RNA.494-201ENST00000384432 111 ntBASIC3.47□□□□□ -1.85
HOXA2O43364 AL451046.2-201ENST00000403074 277 ntBASIC3.47□□□□□ -1.85
HOXA2O43364 SNORA7.5-201ENST00000410672 110 ntBASIC3.47□□□□□ -1.85
HOXA2O43364 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXA2O43364 AL445687.1-201ENST00000439946 251 ntBASIC3.47□□□□□ -1.85
HOXA2O43364 RPL23AP63-201ENST00000498752 471 ntBASIC3.47□□□□□ -1.85
HOXA2O43364 MIR2682-201ENST00000580305 110 ntBASIC3.47□□□□□ -1.85
HOXA2O43364 MIR622-201ENST00000638396 96 ntBASIC3.47□□□□□ -1.85
HOXA2O43364 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXA2O43364 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXA2O43364 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HOXA2O43364 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
HOXA2O43364 AL442644.1-201ENST00000454390 3105 ntBASIC3.46□□□□□ -1.85
HOXA2O43364 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
HOXA2O43364 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
HOXA2O43364 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA2O43364 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA2O43364 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
HOXA2O43364 RNU6-228P-201ENST00000362700 106 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 SNORD115-3-201ENST00000363100 82 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 RNU6-833P-201ENST00000363486 107 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 RNU6-1019P-201ENST00000364424 107 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 RNU6-60P-201ENST00000364792 103 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 Y_RNA.377-201ENST00000365644 108 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 RNU6-950P-201ENST00000384651 107 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 RNU6-1319P-201ENST00000390855 104 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 RNU6-747P-201ENST00000390928 104 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 RNU6-241P-201ENST00000391148 104 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 AL034345.1-201ENST00000407768 123 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 RNU6-177P-201ENST00000411257 104 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXA2O43364 RPL39P39-201ENST00000455840 151 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 MIR4738-201ENST00000579134 87 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 AC006386.2-201ENST00000624491 75 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 AC012005.1-201ENST00000624575 75 ntBASIC3.46□□□□□ -1.86
HOXA2O43364 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA2O43364 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXA2O43364 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA2O43364 Y_RNA.171-201ENST00000363760 102 ntBASIC3.45□□□□□ -1.86
HOXA2O43364 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HOXA2O43364 RNU6-679P-201ENST00000391003 106 ntBASIC3.45□□□□□ -1.86
HOXA2O43364 RNA5SP229-201ENST00000410809 99 ntBASIC3.45□□□□□ -1.86
HOXA2O43364 Y_RNA.659-201ENST00000515994 113 ntBASIC3.45□□□□□ -1.86
HOXA2O43364 RNU7-53P-201ENST00000516705 60 ntBASIC3.45□□□□□ -1.86
HOXA2O43364 MIR4513-201ENST00000581077 86 ntBASIC3.45□□□□□ -1.86
HOXA2O43364 AC022513.1-201ENST00000624512 117 ntBASIC3.45□□□□□ -1.86
HOXA2O43364 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA2O43364 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA2O43364 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA2O43364 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA2O43364 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA2O43364 SNORD115-2-201ENST00000362842 82 ntBASIC3.44□□□□□ -1.86
HOXA2O43364 SNORD115-20-201ENST00000365099 82 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms