Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 MIR2681-201ENST00000581814 105 ntBASIC1.95□□□□□ -2.1
NKX1-2Q9UD57 AL049861.1-201ENST00000603130 150 ntBASIC1.95□□□□□ -2.1
NKX1-2Q9UD57 JPX_2.1-201ENST00000614161 69 ntBASIC1.95□□□□□ -2.1
NKX1-2Q9UD57 MIR126-201ENST00000362291 85 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 RNU6-682P-201ENST00000363843 106 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 RNA5SP99-201ENST00000364020 114 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 MIR616-201ENST00000385293 97 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 SNORA12.1-201ENST00000390873 148 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 RNA5SP496-201ENST00000391240 109 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 AL606845.1-201ENST00000404881 255 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 RNU4-53P-201ENST00000410828 140 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 Z98742.3-201ENST00000418637 326 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 SNORD11-201ENST00000459124 84 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 RNU6-1219P-201ENST00000516143 112 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 RNU6-561P-201ENST00000516222 102 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 RNA5SP148-201ENST00000516527 94 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 MIR4744-201ENST00000581563 82 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 AC072026.1-201ENST00000605023 201 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 AL021707.8-201ENST00000609428 183 ntBASIC1.94□□□□□ -2.1
NKX1-2Q9UD57 AL359851.1-201ENST00000569460 4997 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 Y_RNA.182-201ENST00000363880 111 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 MIR1289-2-201ENST00000408360 111 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 RN7SKP200-201ENST00000410564 320 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 RN7SKP101-201ENST00000411376 320 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 NDUFA4P2-201ENST00000489989 244 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 OR9P1P-201ENST00000496431 281 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 AC108729.3-201ENST00000513484 108 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 Y_RNA.797-201ENST00000515977 94 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 FTX_2.1-201ENST00000618816 94 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 U6.106-201ENST00000636360 105 ntBASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NKX1-2Q9UD57 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 Y_RNA.435-201ENST00000384095 112 ntBASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 MIR522-201ENST00000385071 87 ntBASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 RNU6-578P-201ENST00000390980 103 ntBASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 AC074198.2-201ENST00000508153 258 ntBASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 RNU6-1053P-201ENST00000515930 101 ntBASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 AC108706.1-201ENST00000611053 297 ntBASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 AC008555.8-201ENST00000623602 2168 ntBASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NKX1-2Q9UD57 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 SNORD114-1-201ENST00000362705 72 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 Y_RNA.121-201ENST00000363309 113 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 Y_RNA.412-201ENST00000384001 104 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 RNU6-1031P-201ENST00000384773 107 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 MIR17-201ENST00000385012 84 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 RNU6-1228P-201ENST00000391014 107 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 RNA5SP482-201ENST00000391269 118 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 Y_RNA.622-201ENST00000411091 108 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 AC245517.4-201ENST00000448601 281 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 SNRPGP8-201ENST00000454064 226 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 snoU13.27-201ENST00000459278 104 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 RNU7-28P-201ENST00000516759 62 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 RNU6-1116P-201ENST00000517269 99 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 AC098479.1-201ENST00000609225 154 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 AL391903.3-201ENST00000612158 163 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 uc_338.4-201ENST00000616635 176 ntBASIC1.91□□□□□ -2.1
NKX1-2Q9UD57 RNU6-103P-201ENST00000363686 107 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 Y_RNA.270-201ENST00000364693 104 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 SNORD50B-201ENST00000364995 70 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 RNU6-131P-201ENST00000391144 107 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 RN7SKP223-201ENST00000410582 62 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 AC009310.1-201ENST00000414414 451 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 FTH1P12-201ENST00000432137 551 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 AC023449.1-201ENST00000454464 154 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 RNU7-34P-201ENST00000459394 64 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 RNA5SP481-201ENST00000516814 122 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 MIR4709-201ENST00000577272 72 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 MIR4498-201ENST00000577599 66 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 SNORA28-201ENST00000606769 126 ntBASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
NKX1-2Q9UD57 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 Y_RNA.355-201ENST00000365462 98 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 RNU6-886P-201ENST00000384319 105 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 RNU6-950P-201ENST00000384651 107 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 PCNPP3-201ENST00000393579 471 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 AL034345.1-201ENST00000407768 123 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 CALM2P4-201ENST00000430810 426 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 Y_RNA.662-201ENST00000516028 97 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 AC109810.1-201ENST00000534066 224 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 MRPS18CP4-201ENST00000535821 231 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 MIR1273D-201ENST00000577266 86 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 MIR4762-201ENST00000585261 75 ntBASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX1-2Q9UD57 MIRLET7C-201ENST00000362160 84 ntBASIC1.88□□□□□ -2.11
NKX1-2Q9UD57 MIR337-201ENST00000362281 93 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms