Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HPS1Q92902 RNU1-23P-201ENST00000363361 144 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 RN7SKP192-201ENST00000411291 327 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.34□□□□□ -1.87
HPS1Q92902 ATP5J2P3-201ENST00000451550 258 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 AL031183.1-201ENST00000457667 207 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 RNU1-98P-201ENST00000458992 160 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 TRBV12-1-201ENST00000479785 344 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 RNA5SP164-201ENST00000516533 110 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 RNU7-53P-201ENST00000516705 60 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 RNA5SP179-201ENST00000517284 121 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 AC007536.1-201ENST00000533382 349 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 MIR3944-201ENST00000581277 108 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 RNU6-90P-201ENST00000606352 106 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 SNORA51-201ENST00000606420 132 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 AC027279.3-201ENST00000625055 122 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 SNORD3E-202ENST00000627253 216 ntBASIC3.34□□□□□ -1.87
HPS1Q92902 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
HPS1Q92902 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.88
HPS1Q92902 GABRG2-229ENST00000641017 3628 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HPS1Q92902 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HPS1Q92902 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
HPS1Q92902 RNU6-624P-201ENST00000363411 107 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 Y_RNA.340-201ENST00000365330 92 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 RNU6-163P-201ENST00000384396 106 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 MIR34C-201ENST00000384831 77 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 MIR206-201ENST00000384872 86 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 AC015922.2-201ENST00000435593 184 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 CYP2C59P-201ENST00000457790 269 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.33□□□□□ -1.88
HPS1Q92902 SNORA25.13-201ENST00000516395 103 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 AC091167.4-201ENST00000605079 184 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 MIR6717-201ENST00000622747 73 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HPS1Q92902 MIR7157-201ENST00000635801 60 ntBASIC3.33□□□□□ -1.88
HPS1Q92902 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HPS1Q92902 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HPS1Q92902 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.32□□□□□ -1.88
HPS1Q92902 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HPS1Q92902 RNA5SP399-201ENST00000364003 117 ntBASIC3.32□□□□□ -1.88
HPS1Q92902 SNORA1.2-201ENST00000365189 134 ntBASIC3.32□□□□□ -1.88
HPS1Q92902 RNU6-1307P-201ENST00000391012 103 ntBASIC3.32□□□□□ -1.88
HPS1Q92902 SNORA3.3-201ENST00000408712 125 ntBASIC3.32□□□□□ -1.88
HPS1Q92902 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS1Q92902 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HPS1Q92902 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.32□□□□□ -1.88
HPS1Q92902 SNORA48.11-201ENST00000517015 89 ntBASIC3.32□□□□□ -1.88
HPS1Q92902 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HPS1Q92902 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HPS1Q92902 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HPS1Q92902 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HPS1Q92902 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HPS1Q92902 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HPS1Q92902 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
HPS1Q92902 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HPS1Q92902 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
HPS1Q92902 MIR1236-201ENST00000408340 102 ntBASIC3.31□□□□□ -1.88
HPS1Q92902 AC245047.3-201ENST00000429428 127 ntBASIC3.31□□□□□ -1.88
HPS1Q92902 RN7SL323P-201ENST00000494712 295 ntBASIC3.31□□□□□ -1.88
HPS1Q92902 RNU6-826P-201ENST00000516827 104 ntBASIC3.31□□□□□ -1.88
HPS1Q92902 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
HPS1Q92902 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.31□□□□□ -1.88
HPS1Q92902 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HPS1Q92902 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HPS1Q92902 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HPS1Q92902 MIRLET7C-201ENST00000362160 84 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 Y_RNA.173-201ENST00000363776 113 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 MIR7-3-201ENST00000384898 110 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 FO393413.1-201ENST00000402892 195 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 MIR1265-201ENST00000408444 86 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 RN7SKP111-201ENST00000410349 271 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.3□□□□□ -1.88
HPS1Q92902 SNORA71B-202ENST00000439232 272 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 RNU6-871P-201ENST00000516122 100 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 RNU7-153P-201ENST00000516455 62 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 RNU6-1116P-201ENST00000517269 99 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.3□□□□□ -1.88
HPS1Q92902 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.3□□□□□ -1.88
HPS1Q92902 AL356280.1-201ENST00000603614 379 ntBASIC3.3□□□□□ -1.88
HPS1Q92902 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.3□□□□□ -1.88
HPS1Q92902 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HPS1Q92902 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.3□□□□□ -1.88
HPS1Q92902 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
HPS1Q92902 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HPS1Q92902 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HPS1Q92902 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.29□□□□□ -1.88
HPS1Q92902 RNU6-411P-201ENST00000384451 107 ntBASIC3.29□□□□□ -1.88
HPS1Q92902 MIR23A-201ENST00000385245 73 ntBASIC3.29□□□□□ -1.88
HPS1Q92902 RNU6-1077P-201ENST00000410506 102 ntBASIC3.29□□□□□ -1.88
HPS1Q92902 RNU6-1328P-201ENST00000410938 106 ntBASIC3.29□□□□□ -1.88
HPS1Q92902 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS1Q92902 AL450471.1-201ENST00000447509 127 ntBASIC3.29□□□□□ -1.88
HPS1Q92902 snoU13.22-201ENST00000459428 104 ntBASIC3.29□□□□□ -1.88
HPS1Q92902 RNU6-917P-201ENST00000516294 104 ntBASIC3.29□□□□□ -1.88
HPS1Q92902 RNU6-958P-201ENST00000516995 106 ntBASIC3.29□□□□□ -1.88
HPS1Q92902 YPEL5P3-201ENST00000547227 352 ntBASIC3.29□□□□□ -1.88
HPS1Q92902 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms