Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RN7SL429P-201ENST00000479090 223 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 RN7SL489P-201ENST00000486185 223 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 RN7SL327P-201ENST00000488659 223 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 RN7SL633P-201ENST00000488974 297 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 RNU6-65P-201ENST00000516332 98 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 RNU2-35P-201ENST00000516446 142 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 SNORD36C-201ENST00000516733 66 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 RNU7-70P-201ENST00000516941 66 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 RN7SL853P-201ENST00000617250 223 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 AC093010.3-201ENST00000570269 15214 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 AC080128.1-201ENST00000474389 1917 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 FAM35CP-201ENST00000554755 2470 ntBASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHKBP1Q8TBC3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 RNA5SP295-201ENST00000362655 121 ntBASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 SNORD115-28-201ENST00000363931 81 ntBASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-546P-201ENST00000383991 107 ntBASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 Y_RNA.440-201ENST00000384120 114 ntBASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-301P-201ENST00000384277 107 ntBASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 RPL39P39-201ENST00000455840 151 ntBASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 SNORA31.1-201ENST00000515993 133 ntBASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 SNORA31.5-201ENST00000516190 133 ntBASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 MIR3683-201ENST00000580847 82 ntBASIC2.96□□□□□ -1.94
SHKBP1Q8TBC3 RNY1P1-201ENST00000364372 112 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 Y_RNA.547-201ENST00000384654 119 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 AP000567.1-201ENST00000406413 156 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-938P-201ENST00000411285 103 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 SNRPGP14-201ENST00000435400 219 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 RNU7-61P-201ENST00000515897 61 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 RNU2-13P-201ENST00000515909 113 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 RNU7-6P-201ENST00000516845 62 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 AC022254.1-201ENST00000567857 235 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 U6.108-201ENST00000637764 58 ntBASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.95□□□□□ -1.94
SHKBP1Q8TBC3 AC091564.4-201ENST00000533934 2194 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-743P-201ENST00000364151 106 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 SNORA4.2-201ENST00000365313 147 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 MIR802-201ENST00000390235 94 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 RNA5SP467-201ENST00000391274 118 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 MIR887-201ENST00000401258 79 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 AL138827.1-201ENST00000402666 306 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 AC096949.1-201ENST00000412047 152 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 AC113410.1-201ENST00000505029 247 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 IGLL4P-201ENST00000614590 133 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHKBP1Q8TBC3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 SNORA1B-201ENST00000362535 133 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-268P-201ENST00000364174 107 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 Y_RNA.221-201ENST00000364248 96 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 RNU1-112P-201ENST00000364401 164 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 Y_RNA.244-201ENST00000364484 109 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 SNORA14A-201ENST00000364773 135 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-1276P-201ENST00000365372 104 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-787P-201ENST00000384032 107 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-991P-201ENST00000516168 107 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 AC002984.1-201ENST00000591692 448 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 U7.3-201ENST00000616123 62 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 AC087741.2-201ENST00000619415 172 ntBASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SHKBP1Q8TBC3 Y_RNA.10-201ENST00000362371 110 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 RNU4-82P-201ENST00000362443 140 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 Y_RNA.73-201ENST00000362910 113 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-497P-201ENST00000365316 104 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-442P-201ENST00000383968 104 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 Y_RNA.531-201ENST00000384589 121 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-644P-201ENST00000391155 98 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-1077P-201ENST00000410506 102 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 AC004941.2-201ENST00000427009 228 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 AL445646.1-201ENST00000431784 216 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 AL353689.1-201ENST00000438895 199 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 AC007536.1-201ENST00000533382 349 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 MIR3618-201ENST00000580330 88 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 HSPE1P19-201ENST00000603327 295 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 AC012531.4-201ENST00000616509 177 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 AC091932.4-201ENST00000623386 200 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.92□□□□□ -1.94
SHKBP1Q8TBC3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 Y_RNA.351-201ENST00000365436 96 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-675P-201ENST00000384236 104 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 MIR196B-201ENST00000384852 84 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 MIR577-201ENST00000385196 96 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 AL451046.2-201ENST00000403074 277 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 RNA5SP344-201ENST00000411081 104 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms