Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 POLR2J4-204ENST00000418424 324 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 AL049873.1-201ENST00000480540 376 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 AC006483.1-201ENST00000487308 313 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 AC093259.1-201ENST00000509755 300 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 SNORA31.4-201ENST00000516049 129 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 AC103810.7-201ENST00000607821 91 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA4P43681 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 RNU6-457P-201ENST00000363999 107 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 RNU6-524P-201ENST00000384270 107 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 RNA5SP38-201ENST00000410750 119 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 RNU4-47P-201ENST00000410876 114 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 SNX2P2-201ENST00000424553 323 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 HMGN2P34-201ENST00000437647 269 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 HMGN2P18-201ENST00000450680 270 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 SNORD59.2-201ENST00000516873 68 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.12□□□□□ -1.91
CHRNA4P43681 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CHRNA4P43681 MIR4762-201ENST00000585261 75 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CHRNA4P43681 AC021613.1-201ENST00000623880 111 ntBASIC3.12□□□□□ -1.91
CHRNA4P43681 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHRNA4P43681 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA4P43681 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA4P43681 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CHRNA4P43681 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA4P43681 SNORD77B-201ENST00000391112 67 ntBASIC3.11□□□□□ -1.91
CHRNA4P43681 Z98742.2-201ENST00000431564 187 ntBASIC3.11□□□□□ -1.91
CHRNA4P43681 RN7SL20P-201ENST00000488827 297 ntBASIC3.11□□□□□ -1.91
CHRNA4P43681 AC108729.3-201ENST00000513484 108 ntBASIC3.11□□□□□ -1.91
CHRNA4P43681 RNU6-523P-201ENST00000516304 54 ntBASIC3.11□□□□□ -1.91
CHRNA4P43681 AC103810.1-201ENST00000579873 453 ntBASIC3.11□□□□□ -1.91
CHRNA4P43681 MIR376B-201ENST00000614515 100 ntBASIC3.11□□□□□ -1.91
CHRNA4P43681 AL512310.12-203ENST00000640543 90 ntBASIC3.11□□□□□ -1.91
CHRNA4P43681 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA4P43681 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA4P43681 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA4P43681 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
CHRNA4P43681 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CHRNA4P43681 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHRNA4P43681 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.1□□□□□ -1.91
CHRNA4P43681 AC073325.2-201ENST00000339545 159 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 MIR342-201ENST00000362212 99 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 RNU6-315P-201ENST00000362666 107 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 SNORA38.1-201ENST00000364172 131 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 U8.5-201ENST00000364528 136 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHRNA4P43681 SNORA54-201ENST00000384281 123 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 SNORD15B-201ENST00000384714 146 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 SNORA48.2-201ENST00000390926 124 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.1□□□□□ -1.91
CHRNA4P43681 AC090844.1-201ENST00000422019 156 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 SNORA4.4-201ENST00000515921 135 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 RNU6-539P-201ENST00000516665 103 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 AP000867.2-201ENST00000532468 320 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 MIR5004-201ENST00000579078 107 ntBASIC3.1□□□□□ -1.91
CHRNA4P43681 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.1□□□□□ -1.91
CHRNA4P43681 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.1□□□□□ -1.91
CHRNA4P43681 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CHRNA4P43681 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHRNA4P43681 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHRNA4P43681 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHRNA4P43681 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.09□□□□□ -1.91
CHRNA4P43681 SNORA1B-201ENST00000362535 133 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 SNORD115-2-201ENST00000362842 82 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 RNA5SP374-201ENST00000362939 125 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 snoU2-30.1-201ENST00000365012 70 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 SNORD115-20-201ENST00000365099 82 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 SNORA46-201ENST00000384762 135 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 RNU6-1077P-201ENST00000410506 102 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 AC060773.1-201ENST00000421698 310 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 MIR1270-201ENST00000459320 83 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 AL049830.1-201ENST00000468034 425 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 AC090255.1-201ENST00000495779 349 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 AC093729.1-201ENST00000513074 128 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 RNU6-998P-201ENST00000515894 101 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 AC245166.1-201ENST00000521012 253 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 AP002004.2-201ENST00000531656 154 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.09□□□□□ -1.91
CHRNA4P43681 MIR3124-201ENST00000582636 67 ntBASIC3.09□□□□□ -1.91
CHRNA4P43681 MAPK10-362ENST00000641864 4484 ntBASIC3.09□□□□□ -1.92
CHRNA4P43681 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CHRNA4P43681 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHRNA4P43681 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHRNA4P43681 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHRNA4P43681 snoU2-30.2-201ENST00000362805 70 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 Y_RNA.336-201ENST00000365307 109 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 Z98742.3-201ENST00000418637 326 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 AL161932.1-201ENST00000437408 146 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 AC107083.1-201ENST00000439643 279 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 RNU7-113P-201ENST00000459273 62 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 RN7SL75P-201ENST00000461926 281 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 SNORA31.1-201ENST00000515993 133 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 SNORA31.5-201ENST00000516190 133 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 SCARNA3-201ENST00000517097 143 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms