Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
HOXA10P31260 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA10P31260 RNU6-418P-201ENST00000384035 107 ntBASIC3.1□□□□□ -1.91
HOXA10P31260 Y_RNA.466-201ENST00000384294 113 ntBASIC3.1□□□□□ -1.91
HOXA10P31260 MIR520G-201ENST00000385064 90 ntBASIC3.1□□□□□ -1.91
HOXA10P31260 AL356320.1-201ENST00000429616 163 ntBASIC3.1□□□□□ -1.91
HOXA10P31260 PGBD4P5-201ENST00000445958 426 ntBASIC3.1□□□□□ -1.91
HOXA10P31260 AP000867.2-201ENST00000532468 320 ntBASIC3.1□□□□□ -1.91
HOXA10P31260 AC008507.4-201ENST00000585464 127 ntBASIC3.1□□□□□ -1.91
HOXA10P31260 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HOXA10P31260 AC131280.1-202ENST00000624067 4211 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 Y_RNA.107-201ENST00000363190 121 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 RNU6-1134P-201ENST00000365156 101 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 MT-TI-201ENST00000387365 69 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 HMGN1P7-201ENST00000491722 313 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXA10P31260 RNU6-693P-201ENST00000516134 107 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 Y_RNA.666-201ENST00000516187 112 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 RNU6-1096P-201ENST00000517089 102 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 AC141557.1-201ENST00000540982 400 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HOXA10P31260 MIR6733-201ENST00000635723 61 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 AC016717.2-201ENST00000609089 5141 ntBASIC3.09□□□□□ -1.91
HOXA10P31260 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA10P31260 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA10P31260 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA10P31260 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXA10P31260 VTRNA1-1-201ENST00000363120 99 ntBASIC3.08□□□□□ -1.92
HOXA10P31260 Y_RNA.344-201ENST00000365381 112 ntBASIC3.08□□□□□ -1.92
HOXA10P31260 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HOXA10P31260 SNRPGP13-201ENST00000442212 177 ntBASIC3.08□□□□□ -1.92
HOXA10P31260 AC234781.5-201ENST00000508429 271 ntBASIC3.08□□□□□ -1.92
HOXA10P31260 MIR376A2-201ENST00000636782 80 ntBASIC3.08□□□□□ -1.92
HOXA10P31260 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXA10P31260 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA10P31260 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA10P31260 RNU6-349P-201ENST00000362402 107 ntBASIC3.07□□□□□ -1.92
HOXA10P31260 RNU6-228P-201ENST00000362700 106 ntBASIC3.07□□□□□ -1.92
HOXA10P31260 RNU6-486P-201ENST00000363116 107 ntBASIC3.07□□□□□ -1.92
HOXA10P31260 RNU6-813P-201ENST00000384691 107 ntBASIC3.07□□□□□ -1.92
HOXA10P31260 MIR548D2-201ENST00000384955 97 ntBASIC3.07□□□□□ -1.92
HOXA10P31260 MIR518F-201ENST00000384973 87 ntBASIC3.07□□□□□ -1.92
HOXA10P31260 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXA10P31260 AL445687.1-201ENST00000439946 251 ntBASIC3.07□□□□□ -1.92
HOXA10P31260 RNU6-893P-201ENST00000458841 100 ntBASIC3.07□□□□□ -1.92
HOXA10P31260 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA10P31260 AC090517.3-201ENST00000625170 141 ntBASIC3.07□□□□□ -1.92
HOXA10P31260 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA10P31260 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA10P31260 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HOXA10P31260 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXA10P31260 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA10P31260 AC007336.1-201ENST00000576365 3828 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 RNA5SP456-201ENST00000364002 114 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 RNU6-944P-201ENST00000364023 107 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 Y_RNA.298-201ENST00000364960 107 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 Y_RNA.410-201ENST00000383992 113 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 Y_RNA.593-201ENST00000410292 98 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA10P31260 SNRPGP10-201ENST00000432323 225 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 RPPH1-2P-201ENST00000516688 293 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 MIR1273D-201ENST00000577266 86 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 AC087685.1-201ENST00000587507 141 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 AC103810.6-201ENST00000606708 136 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA10P31260 MIR3202-2-201ENST00000635980 79 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 AL162726.3-218ENST00000636401 95 ntBASIC3.06□□□□□ -1.92
HOXA10P31260 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA10P31260 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXA10P31260 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXA10P31260 SNORA63D-201ENST00000364359 132 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 SNORD114-30-201ENST00000364448 72 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 Y_RNA.253-201ENST00000364562 112 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 Y_RNA.265-201ENST00000364677 108 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 RNU6-690P-201ENST00000365242 106 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 RNU6-1274P-201ENST00000384557 107 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 SUMO1P4-201ENST00000429430 302 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 Z98742.2-201ENST00000431564 187 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA10P31260 AC004486.1-201ENST00000546846 233 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 AC103810.1-201ENST00000579873 453 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXA10P31260 FO624990.1-201ENST00000636373 85 ntBASIC3.05□□□□□ -1.92
HOXA10P31260 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
HOXA10P31260 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXA10P31260 Y_RNA.17-201ENST00000362433 111 ntBASIC3.04□□□□□ -1.92
HOXA10P31260 RNU1-96P-201ENST00000364163 162 ntBASIC3.04□□□□□ -1.92
HOXA10P31260 RNU6-438P-201ENST00000365561 103 ntBASIC3.04□□□□□ -1.92
HOXA10P31260 RNU6-1124P-201ENST00000384169 107 ntBASIC3.04□□□□□ -1.92
HOXA10P31260 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXA10P31260 snoU13.23-201ENST00000458863 104 ntBASIC3.04□□□□□ -1.92
HOXA10P31260 SCARNA23-201ENST00000516060 130 ntBASIC3.04□□□□□ -1.92
HOXA10P31260 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.04□□□□□ -1.92
HOXA10P31260 AC046143.2-201ENST00000609789 160 ntBASIC3.04□□□□□ -1.92
HOXA10P31260 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.04□□□□□ -1.92
HOXA10P31260 AP006437.1-201ENST00000641440 3685 ntBASIC3.04□□□□□ -1.92
HOXA10P31260 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HOXA10P31260 ZNF720P1-201ENST00000562403 1939 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms