Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 Y_RNA.659-201ENST00000515994 113 ntBASIC3.61□□□□□ -1.83
ALDH1A1P00352 AP002004.2-201ENST00000531656 154 ntBASIC3.61□□□□□ -1.83
ALDH1A1P00352 MIR548BB-201ENST00000626714 66 ntBASIC3.61□□□□□ -1.83
ALDH1A1P00352 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALDH1A1P00352 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ALDH1A1P00352 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALDH1A1P00352 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALDH1A1P00352 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALDH1A1P00352 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALDH1A1P00352 MIR22-201ENST00000362190 85 ntBASIC3.6□□□□□ -1.83
ALDH1A1P00352 Y_RNA.94-201ENST00000363068 106 ntBASIC3.6□□□□□ -1.83
ALDH1A1P00352 SNORD116-10-201ENST00000363791 102 ntBASIC3.6□□□□□ -1.83
ALDH1A1P00352 RNU6-851P-201ENST00000384565 107 ntBASIC3.6□□□□□ -1.83
ALDH1A1P00352 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ALDH1A1P00352 Y_RNA.607-201ENST00000410597 98 ntBASIC3.6□□□□□ -1.83
ALDH1A1P00352 AL022718.1-201ENST00000412004 84 ntBASIC3.6□□□□□ -1.83
ALDH1A1P00352 AC009969.1-201ENST00000438726 172 ntBASIC3.6□□□□□ -1.83
ALDH1A1P00352 RN7SL93P-201ENST00000463035 293 ntBASIC3.6□□□□□ -1.83
ALDH1A1P00352 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.6□□□□□ -1.83
ALDH1A1P00352 AC006111.3-201ENST00000622137 383 ntBASIC3.6□□□□□ -1.83
ALDH1A1P00352 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALDH1A1P00352 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALDH1A1P00352 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
ALDH1A1P00352 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ALDH1A1P00352 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
ALDH1A1P00352 SNORD68-201ENST00000363214 84 ntBASIC3.59□□□□□ -1.83
ALDH1A1P00352 RNU6-283P-201ENST00000364788 107 ntBASIC3.59□□□□□ -1.83
ALDH1A1P00352 Y_RNA.299-201ENST00000364973 94 ntBASIC3.59□□□□□ -1.83
ALDH1A1P00352 snoU2-30.1-201ENST00000365012 70 ntBASIC3.59□□□□□ -1.83
ALDH1A1P00352 RNU6-546P-201ENST00000383991 107 ntBASIC3.59□□□□□ -1.83
ALDH1A1P00352 SNX2P2-201ENST00000424553 323 ntBASIC3.59□□□□□ -1.83
ALDH1A1P00352 AL035398.1-201ENST00000430869 322 ntBASIC3.59□□□□□ -1.83
ALDH1A1P00352 UBL5P3-201ENST00000475112 231 ntBASIC3.59□□□□□ -1.83
ALDH1A1P00352 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.59□□□□□ -1.83
ALDH1A1P00352 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ALDH1A1P00352 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
ALDH1A1P00352 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
ALDH1A1P00352 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ALDH1A1P00352 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.59□□□□□ -1.84
ALDH1A1P00352 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ALDH1A1P00352 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.59□□□□□ -1.84
ALDH1A1P00352 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.59□□□□□ -1.84
ALDH1A1P00352 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
ALDH1A1P00352 MIR342-201ENST00000362212 99 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 RNU6-1084P-201ENST00000362498 107 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 RNU6-509P-201ENST00000363519 107 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 Y_RNA.191-201ENST00000363972 113 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 Y_RNA.336-201ENST00000365307 109 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 SNORD58A-201ENST00000383875 65 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 RNU6-1083P-201ENST00000384022 107 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 MIR889-201ENST00000401280 79 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 RNU6-1077P-201ENST00000410506 102 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 POLR2J4-204ENST00000418424 324 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 ARF4P2-201ENST00000430209 526 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 AL109933.2-201ENST00000452651 260 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 TRBV12-1-201ENST00000479785 344 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 SNORA31.1-201ENST00000515993 133 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 SNORA31.5-201ENST00000516190 133 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.58□□□□□ -1.84
ALDH1A1P00352 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALDH1A1P00352 AC021613.1-201ENST00000623880 111 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALDH1A1P00352 AC009487.2-201ENST00000420969 6821 ntBASIC3.58□□□□□ -1.84
ALDH1A1P00352 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ALDH1A1P00352 MIR767-201ENST00000390228 109 ntBASIC3.57□□□□□ -1.84
ALDH1A1P00352 RNU4-69P-201ENST00000410677 143 ntBASIC3.57□□□□□ -1.84
ALDH1A1P00352 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.57□□□□□ -1.84
ALDH1A1P00352 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.57□□□□□ -1.84
ALDH1A1P00352 RN7SKP132-201ENST00000516001 208 ntBASIC3.57□□□□□ -1.84
ALDH1A1P00352 SNORD45.4-201ENST00000516629 73 ntBASIC3.57□□□□□ -1.84
ALDH1A1P00352 RNU6-1006P-201ENST00000516998 103 ntBASIC3.57□□□□□ -1.84
ALDH1A1P00352 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ALDH1A1P00352 AC107016.2-201ENST00000547968 190 ntBASIC3.57□□□□□ -1.84
ALDH1A1P00352 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
ALDH1A1P00352 MIR4439-201ENST00000583746 80 ntBASIC3.57□□□□□ -1.84
ALDH1A1P00352 MIR338-201ENST00000636369 67 ntBASIC3.57□□□□□ -1.84
ALDH1A1P00352 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
ALDH1A1P00352 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALDH1A1P00352 Y_RNA.316-201ENST00000365118 111 ntBASIC3.56□□□□□ -1.84
ALDH1A1P00352 Y_RNA.430-201ENST00000384081 110 ntBASIC3.56□□□□□ -1.84
ALDH1A1P00352 SCARNA17.1-201ENST00000516211 143 ntBASIC3.56□□□□□ -1.84
ALDH1A1P00352 SCARNA17.2-201ENST00000516334 143 ntBASIC3.56□□□□□ -1.84
ALDH1A1P00352 RNU1-142P-201ENST00000516682 145 ntBASIC3.56□□□□□ -1.84
ALDH1A1P00352 SCARNA17.4-201ENST00000614296 143 ntBASIC3.56□□□□□ -1.84
ALDH1A1P00352 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALDH1A1P00352 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALDH1A1P00352 GABRG2-229ENST00000641017 3628 ntBASIC3.56□□□□□ -1.84
ALDH1A1P00352 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALDH1A1P00352 RNU6-616P-201ENST00000384353 107 ntBASIC3.55□□□□□ -1.84
ALDH1A1P00352 U8.15-201ENST00000390947 134 ntBASIC3.55□□□□□ -1.84
ALDH1A1P00352 AC108938.1-201ENST00000451204 136 ntBASIC3.55□□□□□ -1.84
ALDH1A1P00352 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.55□□□□□ -1.84
ALDH1A1P00352 AC244205.2-202ENST00000635781 342 ntBASIC3.55□□□□□ -1.84
ALDH1A1P00352 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ALDH1A1P00352 RNU6-633P-201ENST00000362612 103 ntBASIC3.54□□□□□ -1.84
ALDH1A1P00352 RNU1-105P-201ENST00000363470 161 ntBASIC3.54□□□□□ -1.84
ALDH1A1P00352 SNORA27-201ENST00000384323 126 ntBASIC3.54□□□□□ -1.84
ALDH1A1P00352 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.54□□□□□ -1.84
ALDH1A1P00352 CST9LP2-201ENST00000437612 320 ntBASIC3.54□□□□□ -1.84
ALDH1A1P00352 RNU6-998P-201ENST00000515894 101 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms