Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 MIR518F-201ENST00000384973 87 ntBASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 MIR1302-5-201ENST00000408164 150 ntBASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 EDDM3CP-201ENST00000415977 425 ntBASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 FTH1P12-201ENST00000432137 551 ntBASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 RNU1-142P-201ENST00000516682 145 ntBASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 MIR376A2-201ENST00000636782 80 ntBASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 U6.108-201ENST00000637764 58 ntBASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LOC102724428A0A0B4J2F2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 Y_RNA.328-201ENST00000365208 113 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 SNORA51.5-201ENST00000384126 131 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 AL590004.2-201ENST00000404787 371 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 MIR1302-4-201ENST00000408701 150 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 AL353689.1-201ENST00000438895 199 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 HMGN2P32-201ENST00000444648 269 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 RPS26P48-201ENST00000491713 339 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 AC023141.11-201ENST00000508864 202 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 AC015712.3-201ENST00000559380 164 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 MIR1273D-201ENST00000577266 86 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 MIR5197-201ENST00000583721 112 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 AL355297.2-201ENST00000604792 129 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 AP001318.4-201ENST00000616637 121 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LOC102724428A0A0B4J2F2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 RNU6-1014P-201ENST00000383940 103 ntBASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 MIR522-201ENST00000385071 87 ntBASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 MIR561-201ENST00000385216 97 ntBASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 RNU2-63P-201ENST00000410792 194 ntBASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 AL591806.2-201ENST00000433122 173 ntBASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 AL049830.1-201ENST00000468034 425 ntBASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 RNU6-240P-201ENST00000516098 97 ntBASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LOC102724428A0A0B4J2F2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LOC102724428A0A0B4J2F2 SNORA63.5-201ENST00000363548 123 ntBASIC3.17□□□□□ -1.9
LOC102724428A0A0B4J2F2 AL117342.1-201ENST00000404861 406 ntBASIC3.17□□□□□ -1.9
LOC102724428A0A0B4J2F2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.17□□□□□ -1.9
LOC102724428A0A0B4J2F2 DEFB122-202ENST00000569013 197 ntBASIC3.17□□□□□ -1.9
LOC102724428A0A0B4J2F2 AC103810.6-201ENST00000606708 136 ntBASIC3.17□□□□□ -1.9
LOC102724428A0A0B4J2F2 AC046143.2-201ENST00000609789 160 ntBASIC3.17□□□□□ -1.9
LOC102724428A0A0B4J2F2 AC134878.1-201ENST00000619901 243 ntBASIC3.17□□□□□ -1.9
LOC102724428A0A0B4J2F2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.17□□□□□ -1.9
LOC102724428A0A0B4J2F2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LOC102724428A0A0B4J2F2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 Y_RNA.49-201ENST00000362714 112 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 RNU6-640P-201ENST00000363693 105 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 Y_RNA.198-201ENST00000364013 98 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 Y_RNA.410-201ENST00000383992 113 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 MIR802-201ENST00000390235 94 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 HMGN2P3-201ENST00000433603 273 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 HMGN2P5-201ENST00000436882 273 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 RNA5SP281-201ENST00000516504 135 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 RNU6-667P-201ENST00000517186 102 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 MIR3616-201ENST00000584070 92 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 RNU6-94P-201ENST00000607728 107 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 AL353149.1-201ENST00000610667 244 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 AL589743.1-201ENST00000551932 2712 ntBASIC3.16□□□□□ -1.9
LOC102724428A0A0B4J2F2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LOC102724428A0A0B4J2F2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.15□□□□□ -1.9
LOC102724428A0A0B4J2F2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 SNORA1B-201ENST00000362535 133 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 SNORD73B-201ENST00000364394 72 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 U8.6-201ENST00000364939 135 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 SNORA2.2-201ENST00000365473 135 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 SNORD21-201ENST00000383953 95 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 RNA5SP323-201ENST00000391094 133 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 RPL39P34-201ENST00000477141 156 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 AP002004.2-201ENST00000531656 154 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 AC004486.1-201ENST00000546846 233 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 AL449363.1-201ENST00000617815 186 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 AL035470.1-201ENST00000622571 220 ntBASIC3.15□□□□□ -1.91
LOC102724428A0A0B4J2F2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 RNY4P6-201ENST00000363667 96 ntBASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 RNA5SP456-201ENST00000364002 114 ntBASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 Y_RNA.323-201ENST00000365157 109 ntBASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 RNU6-1189P-201ENST00000383958 107 ntBASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 RNU6-1113P-201ENST00000384348 107 ntBASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 MIR181B1-201ENST00000385240 110 ntBASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 RNU6-844P-201ENST00000517175 102 ntBASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 AC006441.5-201ENST00000612680 209 ntBASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LOC102724428A0A0B4J2F2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LOC102724428A0A0B4J2F2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LOC102724428A0A0B4J2F2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LOC102724428A0A0B4J2F2 SNORA33-201ENST00000363664 130 ntBASIC3.13□□□□□ -1.91
LOC102724428A0A0B4J2F2 SNORA8-201ENST00000384574 139 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms