Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 U3.45-201ENST00000607547 219 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 AC110079.1-202ENST00000635213 138 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 MIR6841-201ENST00000637129 72 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.65□□□□□ -1.82
PCDHB3Q9Y5E6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD114-6-201ENST00000364393 72 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 SNORD115-27-201ENST00000364430 82 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 RNU6-1163P-201ENST00000364516 107 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 U8.11-201ENST00000384699 133 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 MIR34B-201ENST00000385076 84 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 CST2P1-201ENST00000425770 87 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 AL606517.2-201ENST00000442855 241 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 U8.18-201ENST00000459285 133 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 RN7SL297P-201ENST00000483161 293 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 MIR5187-201ENST00000583479 76 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 AL356280.1-201ENST00000603614 379 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 AC145423.2-201ENST00000610631 239 ntBASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB3Q9Y5E6 AL442644.1-201ENST00000454390 3105 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 Y_RNA.140-201ENST00000363474 103 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 MIR592-201ENST00000384959 97 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 MIR483-201ENST00000385070 76 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 AC093578.1-201ENST00000415219 368 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 AL035423.1-201ENST00000420331 213 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 AC245047.3-201ENST00000429428 127 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 RN7SL330P-201ENST00000469709 307 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 UBL5P1-201ENST00000507979 193 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 RNU7-181P-201ENST00000517234 74 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 RNU6-1116P-201ENST00000517269 99 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 MIR3152-201ENST00000579801 74 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 AL137849.1-201ENST00000604767 169 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 AC096644.4-201ENST00000563417 2912 ntBASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB3Q9Y5E6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 RNU6-524P-201ENST00000384270 107 ntBASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 RNU6-163P-201ENST00000384396 106 ntBASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 RNU1-101P-201ENST00000391171 127 ntBASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 MIR1267-201ENST00000408723 78 ntBASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 UBL5P3-201ENST00000475112 231 ntBASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 AC007179.3-201ENST00000604976 235 ntBASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 SEPT14P17-201ENST00000617978 177 ntBASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 MIR7515-201ENST00000637837 67 ntBASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB3Q9Y5E6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 RNU6-457P-201ENST00000363999 107 ntBASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 RNU6-424P-201ENST00000384367 105 ntBASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 AC110768.1-201ENST00000509222 400 ntBASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 AL161756.2-201ENST00000604597 246 ntBASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB3Q9Y5E6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 AC093010.3-201ENST00000570269 15214 ntBASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 SNORA32-201ENST00000384072 121 ntBASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 RPS29P31-201ENST00000446147 164 ntBASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 CYCSP35-201ENST00000451978 304 ntBASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 RNU7-34P-201ENST00000459394 64 ntBASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 RNU6-667P-201ENST00000517186 102 ntBASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 SNORA70.24-201ENST00000517233 118 ntBASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 AC022695.1-201ENST00000522089 237 ntBASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB3Q9Y5E6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB3Q9Y5E6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHB3Q9Y5E6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB3Q9Y5E6 RNU6-862P-201ENST00000362804 105 ntBASIC3.6□□□□□ -1.83
PCDHB3Q9Y5E6 RNU6-283P-201ENST00000364788 107 ntBASIC3.6□□□□□ -1.83
PCDHB3Q9Y5E6 MIR218-2-201ENST00000385006 110 ntBASIC3.6□□□□□ -1.83
PCDHB3Q9Y5E6 RN7SKP192-201ENST00000411291 327 ntBASIC3.6□□□□□ -1.83
PCDHB3Q9Y5E6 AL445685.2-201ENST00000422551 342 ntBASIC3.6□□□□□ -1.83
PCDHB3Q9Y5E6 AC015922.2-201ENST00000435593 184 ntBASIC3.6□□□□□ -1.83
PCDHB3Q9Y5E6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHB3Q9Y5E6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms